amel4_ncbi_hmm11035 (Apis mellifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 amel4_ncbi_hmm11035 T31836_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TARDBP
M074_0.6 		Homo sapiens GAAUGD RNAcompete
Ray et al.(2013)
RNCMPT00076 		0.754
CG7804
M137_0.6 		Drosophila melanogaster WGKRUGR RNAcompete
Ray et al.(2013)
RNCMPT00146 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm11035 RRM 108 176
amel4_ncbi_hmm11035 RRM 193 245

Links

Other RRM family RBPs
Other Apis mellifera RBPs

71 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nasonia_NCBI_hmm274594 Nasonia vitripennis nasonia_NCBI_hmm274594 I 0.992
GK15864 Drosophila willistoni FBgn0217867 I 0.836
PHUM575260 Pediculus humanus PHUM575260 I 0.828
GD25005 Drosophila simulans FBgn0196318 I 0.828
GM15502 Drosophila sechellia FBgn0170420 I 0.828
TBPH Drosophila melanogaster FBgn0025790 I 0.828
GE11522 Drosophila yakuba FBgn0229324 I 0.828
GH20198 Drosophila grimshawi FBgn0127662 I 0.828
GI20724 Drosophila mojavensis FBgn0143459 I 0.828
GG19989 Drosophila erecta FBgn0112189 I 0.828
GJ21868 Drosophila virilis FBgn0208985 I 0.820
GA10247-RA Drosophila pseudoobscura FBgn0070305 I 0.811
GF12452 Drosophila ananassae FBgn0089489 I 0.811
GL10927 Drosophila persimilis FBgn0148537 I 0.811
BGIBMGA006832 Bombyx mori BGIBMGA006832 N 0.794
fgenesh1_pg.C_scaffold_6000249 Daphnia pulex fgenesh1_pg.C_scaffold_6000249 N 0.788
Ame_R011012 Ailuropoda melanoleuca Ame_R011012 I 0.770
TARDBP Taeniopygia guttata ENSTGUG00000003255 I 0.770
TARDBP Ornithorhynchus anatinus ENSOANG00000013320 I 0.770
TARDBP Vicugna pacos ENSVPAG00000009543 I 0.770
LOC100014246 Monodelphis domestica ENSMODG00000011233 I 0.770
TARDBP Tursiops truncatus ENSTTRG00000001312 I 0.770
TARDBP Tupaia belangeri ENSTBEG00000000263 I 0.770
TARDBP Cavia porcellus ENSCPOG00000011619 I 0.770
TARDBP Loxodonta africana ENSLAFG00000014421 I 0.770
tardbpl Danio rerio ENSDARG00000004452 I 0.770
LOC100051482 Equus caballus ENSECAG00000008338 I 0.770
TARDBP Echinops telfairi ENSETEG00000004358 I 0.770
TARDBP Erinaceus europaeus ENSEEUG00000003755 I 0.770
TARDBP Macropus eugenii ENSMEUG00000006548 I 0.770
ENSCAFG00000016759 Canis familiaris ENSCAFG00000016759 I 0.770
ENSACAG00000011709 Anolis carolinensis ENSACAG00000011709 I 0.770
TARDBP Dasypus novemcinctus ENSDNOG00000008531 I 0.762
TARDBP Meleagris gallopavo ENSMGAG00000004637 I 0.762
TADBP_CHICK Gallus gallus ENSGALG00000002906 I 0.762
TARDBP Felis catus ENSFCAG00000000050 I 0.762
ENSOCUG00000004049 Oryctolagus cuniculus ENSOCUG00000004049 I 0.762
TARDBP Ochotona princeps ENSOPRG00000006352 I 0.762
Q2KJ45_BOVIN Bos taurus ENSBTAG00000003697 I 0.762
TARDBP Oryzias latipes ENSORLG00000003593 I 0.762
TARDBP Procavia capensis ENSPCAG00000010442 I 0.762
BGIBMGA007518 Bombyx mori BGIBMGA007518 N 0.756
LOC100405373 Callithrix jacchus ENSCJAG00000002381 I 0.754
AAM33247 Xenopus laevis AAM33247 I 0.754
TARDBP Homo sapiens ENSG00000120948 D 0.754
ENSMMUG00000007456 Macaca mulatta ENSMMUG00000007456 I 0.754
TARDBP Tetraodon nigroviridis ENSTNIG00000015173 I 0.754
ENSPPYG00000001894 Pongo pygmaeus ENSPPYG00000001894 I 0.754
TARDBP Tarsius syrichta ENSTSYG00000004077 I 0.754
XR_021519.1 Pan troglodytes ENSPTRG00000000136 I 0.754
tardbp Xenopus tropicalis ENSXETG00000006317 I 0.754
TARDBP Gasterosteus aculeatus ENSGACG00000012164 I 0.754
TARDBP Myotis lucifugus ENSMLUG00000004263 I 0.746
Tardbp Mus musculus ENSMUSG00000041459 I 0.746
TARDBP Oryzias latipes ENSORLG00000005188 I 0.746
TARDBP Gasterosteus aculeatus ENSGACG00000007124 I 0.746
Tardbp Rattus norvegicus ENSRNOG00000012455 I 0.746
Tardbp Dipodomys ordii ENSDORG00000007465 I 0.746
TARDBP Takifugu rubripes ENSTRUG00000012070 I 0.746
estExt_Genewise1Plus.C_8190002 Capitella teleta estExt_Genewise1Plus.C_8190002 I 0.742
CPIJ014288 Culex quinquefasciatus CPIJ014288 N 0.740
CpipJ_CPIJ014288 Culex pipiens CpipJ_CPIJ014288 N 0.740
TARDBP Takifugu rubripes ENSTRUG00000012063 I 0.730
TARDBP Tetraodon nigroviridis ENSTNIG00000014758 I 0.730
170286 Helobdella robusta 170286 I 0.726
e_gw1.17.468.1 Lottia gigantea e_gw1.17.468.1 I 0.724
AGAP003497 Anopheles gambiae AGAP003497 N 0.724
e_gw.96.287.1 Branchiostoma floridae e_gw.96.287.1 I 0.720
AAH44271 Xenopus laevis AAH44271 I 0.713
BGIBMGA012007 Bombyx mori BGIBMGA012007 N 0.710
CG7804 Drosophila melanogaster FBgn0036496 D 0.705