GD25005 (Drosophila simulans)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0196318 T44016_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG7804
M137_0.6 		Drosophila melanogaster WGKRUGR RNAcompete
Ray et al.(2013)
RNCMPT00146 		0.762
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0223407 RRM 109 177
FBpp0223407 RRM 194 246

Links

Other RRM family RBPs
Other Drosophila simulans RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TBPH Drosophila melanogaster FBgn0025790 I 1.000
GM15502 Drosophila sechellia FBgn0170420 I 1.000
GE11522 Drosophila yakuba FBgn0229324 I 0.992
GG19989 Drosophila erecta FBgn0112189 I 0.992
GF12452 Drosophila ananassae FBgn0089489 I 0.959
GL10927 Drosophila persimilis FBgn0148537 I 0.959
GA10247-RA Drosophila pseudoobscura FBgn0070305 I 0.959
GI20724 Drosophila mojavensis FBgn0143459 I 0.951
GK15864 Drosophila willistoni FBgn0217867 I 0.951
GJ21868 Drosophila virilis FBgn0208985 I 0.951
GH20198 Drosophila grimshawi FBgn0127662 I 0.951
nasonia_NCBI_hmm274594 Nasonia vitripennis nasonia_NCBI_hmm274594 I 0.836
amel4_ncbi_hmm11035 Apis mellifera amel4_ncbi_hmm11035 I 0.828
PHUM575260 Pediculus humanus PHUM575260 I 0.820
CG7804 Drosophila melanogaster FBgn0036496 D 0.762
fgenesh1_pg.C_scaffold_6000249 Daphnia pulex fgenesh1_pg.C_scaffold_6000249 N 0.735
AGAP003497 Anopheles gambiae AGAP003497 N 0.732
BGIBMGA007518 Bombyx mori BGIBMGA007518 N 0.732
BGIBMGA006832 Bombyx mori BGIBMGA006832 N 0.730
GD12565 Drosophila simulans FBgn0184292 I 0.730
CpipJ_CPIJ014288 Culex pipiens CpipJ_CPIJ014288 N 0.707
CPIJ014288 Culex quinquefasciatus CPIJ014288 N 0.707
e_gw.96.287.1 Branchiostoma floridae e_gw.96.287.1 I 0.704
170286 Helobdella robusta 170286 I 0.702