ISCW010302 (Ixodes scapularis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ISCW010302 T44846_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ISCW010302-PA RRM 1 34
ISCW010302-PA RRM 50 116
ISCW010302-PA RRM 190 260

Links

Other RRM family RBPs
Other Ixodes scapularis RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
elavl2 Xenopus tropicalis ENSXETG00000009387 I 0.750
amel4_ncbi_hmm5219 Apis mellifera amel4_ncbi_hmm5219 I 0.744
nasonia_NCBI_hmm330804 Nasonia vitripennis nasonia_NCBI_hmm330804 I 0.739
fgenesh1_pg.C_scaffold_8000205 Daphnia pulex fgenesh1_pg.C_scaffold_8000205 I 0.734
ELAVL4 Monodelphis domestica ENSMODG00000001300 I 0.715
CpipJ_CPIJ016143 Culex pipiens CpipJ_CPIJ016143 I 0.712
CPIJ016143 Culex quinquefasciatus CPIJ016143 I 0.712
ELAVL2 Microcebus murinus ENSMICG00000001558 I 0.711
AGAP000965 Anopheles gambiae AGAP000965 I 0.711
Rbp9 Drosophila melanogaster FBgn0010263 D 0.711
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.709
GL26299 Drosophila persimilis FBgn0163881 I 0.706
GH13638 Drosophila grimshawi FBgn0121114 I 0.701