ISCW010309 (Ixodes scapularis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ISCW010309 T44847_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ISCW010309-PA RRM 107 177

Links

Other RRM family RBPs
Other Ixodes scapularis RBPs

79 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH72952 Xenopus laevis AAH72952 N 0.803
SFRS10 Taeniopygia guttata ENSTGUG00000017023 N 0.789
SFRS10 Taeniopygia guttata ENSTGUG00000006742 N 0.789
ENSMGAG00000002853 Meleagris gallopavo ENSMGAG00000002853 N 0.789
tra2b Xenopus tropicalis ENSXETG00000007511 N 0.789
AAI08874 Xenopus laevis AAI08874 N 0.789
Q9DDU8_CHICK Gallus gallus ENSGALG00000006531 N 0.789
AAH44695 Xenopus laevis AAH44695 N 0.789
TRA2B Ornithorhynchus anatinus ENSOANG00000013953 N 0.775
TRA2B Monodelphis domestica ENSMODG00000013248 N 0.775
Tra2b Mus musculus ENSMUSG00000022858 N 0.775
Q8WMQ0_MACMU Macaca mulatta ENSMMUG00000001185 N 0.775
TRA2B Gorilla gorilla ENSGGOG00000009844 N 0.775
TRA2B Homo sapiens ENSG00000136527 D 0.775
TRA2B Oryctolagus cuniculus ENSOCUG00000008940 N 0.775
TRA2B Loxodonta africana ENSLAFG00000017165 N 0.775
TRA2B Pteropus vampyrus ENSPVAG00000008615 N 0.775
TRA2B Tarsius syrichta ENSTSYG00000000652 N 0.775
TRA2B Tursiops truncatus ENSTTRG00000008243 N 0.775
TRA2B Vicugna pacos ENSVPAG00000012015 N 0.775
TRA2B Sorex araneus ENSSARG00000007638 N 0.775
Tra2b Rattus norvegicus ENSRNOG00000001783 N 0.775
ENSPPYG00000014374 Pongo pygmaeus ENSPPYG00000014374 N 0.775
TRA2B Pan troglodytes ENSPTRG00000015707 N 0.775
TRA2B Felis catus ENSFCAG00000010526 N 0.775
TRA2B Ochotona princeps ENSOPRG00000007990 N 0.775
TRA2B Microcebus murinus ENSMICG00000010611 N 0.775
ENSDNOG00000011679 Dasypus novemcinctus ENSDNOG00000011679 N 0.775
LOC100067887 Equus caballus ENSECAG00000012701 N 0.775
TRA2B_BOVIN Bos taurus ENSBTAG00000001697 N 0.775
LOC100398526 Callithrix jacchus ENSCJAG00000014710 N 0.775
TRA2B Cavia porcellus ENSCPOG00000006313 N 0.775
tra2b Danio rerio ENSDARG00000002168 N 0.775
TRA2B Anolis carolinensis ENSACAG00000008084 N 0.775
TRA2B Canis familiaris ENSCAFG00000013345 N 0.775
Ame_R003489 Ailuropoda melanoleuca Ame_R003489 N 0.775
TRA2B Erinaceus europaeus ENSEEUG00000009822 N 0.775
Q6I6X6_ORYLA Oryzias latipes ENSORLG00000016554 N 0.761
TRA2B Gasterosteus aculeatus ENSGACG00000005986 N 0.761
ENSGACG00000010109 Gasterosteus aculeatus ENSGACG00000010109 N 0.761
ENSTNIG00000017210 Tetraodon nigroviridis ENSTNIG00000017210 N 0.761
Q6I6X8_ORYLA Oryzias latipes ENSORLG00000013780 N 0.746
ENSTRUG00000015168 Takifugu rubripes ENSTRUG00000015168 N 0.746
D3ZLN0_RAT Rattus norvegicus ENSRNOG00000002201 N 0.732
TRA2B Myotis lucifugus ENSMLUG00000008670 N 0.732
estExt_Genewise1.C_960100 Capitella teleta estExt_Genewise1.C_960100 N 0.718
JAA_1_estExt_fgenesh1_pg.C_10333 Daphnia pulex JAA_1_estExt_fgenesh1_pg.C_10333 N 0.718
ENSMODG00000009767 Monodelphis domestica ENSMODG00000009767 N 0.718
TRA2A Pan troglodytes ENSPTRG00000018988 N 0.704
TRA2A Choloepus hoffmanni ENSCHOG00000001130 N 0.704
TRA2A Callithrix jacchus ENSCJAG00000001509 N 0.704
ENSPPYG00000017728 Pongo pygmaeus ENSPPYG00000017728 N 0.704
TRA2A Tupaia belangeri ENSTBEG00000013773 N 0.704
Q2KJ71_BOVIN Bos taurus ENSBTAG00000012622 N 0.704
Ame_R009558 Ailuropoda melanoleuca Ame_R009558 N 0.704
TRA2A Sus scrofa ENSSSCG00000015387 N 0.704
TRA2A Canis familiaris ENSCAFG00000002788 N 0.704
Tra2a Rattus norvegicus ENSRNOG00000009156 N 0.704
TRA2A Pteropus vampyrus ENSPVAG00000011298 N 0.704
TRA2A Oryctolagus cuniculus ENSOCUG00000024139 N 0.704
TRA2A Macropus eugenii ENSMEUG00000001202 N 0.704
Tra2a Dipodomys ordii ENSDORG00000009361 N 0.704
TRA2A Myotis lucifugus ENSMLUG00000013972 N 0.704
LOC100068009 Equus caballus ENSECAG00000011508 N 0.704
TRA2A Loxodonta africana ENSLAFG00000006598 N 0.704
TRA2A Erinaceus europaeus ENSEEUG00000015674 N 0.704
TRA2A Homo sapiens ENSG00000164548 N 0.704
TRA2A Gorilla gorilla ENSGGOG00000009053 N 0.704
ENSDNOG00000018192 Dasypus novemcinctus ENSDNOG00000018192 N 0.704
Q8WMQ1_MACMU Macaca mulatta ENSMMUG00000006286 N 0.704
TRA2A Echinops telfairi ENSETEG00000007250 N 0.704
TRA2A Otolemur garnettii ENSOGAG00000009733 N 0.704
TRA2A Ochotona princeps ENSOPRG00000007606 N 0.704
TRA2A Cavia porcellus ENSCPOG00000010739 N 0.704
TRA2A Ornithorhynchus anatinus ENSOANG00000014202 N 0.704
TRA2A Monodelphis domestica ENSMODG00000000807 N 0.704
tra2a Danio rerio ENSDARG00000007863 N 0.704
Tra2a Mus musculus ENSMUSG00000029817 N 0.704
TRA2A Procavia capensis ENSPCAG00000004148 N 0.704