Ppa-rsp-1 (Pristionchus pacificus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PPA18140 T45804_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PPA18140 RRM 5 67
PPA18140 RRM 102 167

Links

Other RRM family RBPs
Other Pristionchus pacificus RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SRSF4 Oryctolagus cuniculus ENSOCUG00000001837 I 0.736
SRSF4 Ochotona princeps ENSOPRG00000010098 I 0.736
Srsf4 Mus musculus ENSMUSG00000028911 I 0.736
SRSF4 Monodelphis domestica ENSMODG00000011052 I 0.736
SRSF4 Meleagris gallopavo ENSMGAG00000002400 I 0.736
SRSF4 Procavia capensis ENSPCAG00000009879 I 0.736
ENSPPYG00000001629 Pongo pygmaeus ENSPPYG00000001629 I 0.736
SRSF4 Tursiops truncatus ENSTTRG00000002572 I 0.736
SRSF4 Sus scrofa ENSSSCG00000003588 I 0.736
Sfrs4 Rattus norvegicus ENSRNOG00000010007 I 0.736
SRSF4 Pan troglodytes ENSPTRG00000000445 I 0.736
SRSF4 Loxodonta africana ENSLAFG00000002575 I 0.736
SRSF4 Macaca mulatta ENSMMUG00000007110 I 0.736
LOC100402973 Callithrix jacchus ENSCJAG00000009971 I 0.736
SRSF4 Erinaceus europaeus ENSEEUG00000008479 I 0.736
Srsf4 Dipodomys ordii ENSDORG00000002459 I 0.736
SRSF4 Cavia porcellus ENSCPOG00000007263 I 0.736
SRSF4 Homo sapiens ENSG00000116350 I 0.736
A7MB38_BOVIN Bos taurus ENSBTAG00000013309 I 0.736
Ame_R018370 Ailuropoda melanoleuca Ame_R018370 I 0.736
SRSF4 Dasypus novemcinctus ENSDNOG00000000968 I 0.736
XP_798746.1 Strongylocentrotus purpuratus XP_798746.1 I 0.729
SRSF4 Tarsius syrichta ENSTSYG00000007903 I 0.729
XP_001180940.1 Strongylocentrotus purpuratus XP_001180940.1 I 0.729
SRSF4 Oryzias latipes ENSORLG00000009430 I 0.729
SRSF4 Gasterosteus aculeatus ENSGACG00000002389 I 0.729
estExt_fgenesh2_pm.C_690014 Branchiostoma floridae estExt_fgenesh2_pm.C_690014 I 0.729
SRSF4 Takifugu rubripes ENSTRUG00000011891 I 0.721
SRSF4 Tetraodon nigroviridis ENSTNIG00000005573 I 0.721
SRSF4 Tetraodon nigroviridis ENSTNIG00000000115 I 0.721
XP_002200515.1 Taeniopygia guttata ENSTGUG00000011492 I 0.721
SRSF5 Oryzias latipes ENSORLG00000009268 I 0.721
ENSGACG00000011761 Gasterosteus aculeatus ENSGACG00000011761 I 0.721
Q5ZKT4_CHICK Gallus gallus ENSGALG00000009484 I 0.713
PACS2 Takifugu rubripes ENSTRUG00000010740 I 0.713
ENSMGAG00000011888 Meleagris gallopavo ENSMGAG00000011888 I 0.713
estExt_Genewise1Plus.C_150169 Daphnia pulex estExt_Genewise1Plus.C_150169 I 0.705