185541 (Helobdella robusta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 185541 T48583_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Rbp9
M124_0.6 		Drosophila melanogaster UUDDGUU RNAcompete
Ray et al.(2013)
RNCMPT00132 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
185541 RRM 22 92
185541 RRM 108 176
185541 RRM 270 340

Links

Other RRM family RBPs
Other Helobdella robusta RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm5219 Apis mellifera amel4_ncbi_hmm5219 I 0.744
nasonia_NCBI_hmm330804 Nasonia vitripennis nasonia_NCBI_hmm330804 I 0.744
estExt_Genewise1Plus.C_1660036 Capitella teleta estExt_Genewise1Plus.C_1660036 I 0.731
AGAP000965 Anopheles gambiae AGAP000965 I 0.730
187316 Helobdella robusta 187316 N 0.730
CPIJ016143 Culex quinquefasciatus CPIJ016143 I 0.726
CpipJ_CPIJ016143 Culex pipiens CpipJ_CPIJ016143 I 0.726
fgenesh2_pg.C_sca_14000012 Lottia gigantea fgenesh2_pg.C_sca_14000012 I 0.725
GL26299 Drosophila persimilis FBgn0163881 I 0.725
GH13638 Drosophila grimshawi FBgn0121114 I 0.720
Rbp9 Drosophila melanogaster FBgn0010263 D 0.720
GK14865 Drosophila willistoni FBgn0216870 I 0.708
GE18193 Drosophila yakuba FBgn0235624 I 0.708
GA28809-RA Drosophila pseudoobscura FBgn0250168 I 0.708
GJ13991 Drosophila virilis FBgn0201209 I 0.708
GM18380 Drosophila sechellia FBgn0173287 I 0.708
GI11879 Drosophila mojavensis FBgn0134637 I 0.708
GG24901 Drosophila erecta FBgn0117030 I 0.708
GF14992 Drosophila ananassae FBgn0092017 I 0.708
fgenesh2_pg.scaffold_219000066 Branchiostoma floridae fgenesh2_pg.scaffold_219000066 I 0.703