estExt_fgenesh1_pg.C_130152 (Cochliobolus heterostrophus C5)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pg.C_130152 T50490_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_130152 RRM 241 311

Links

Other RRM family RBPs
Other Cochliobolus heterostrophus C5 RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTRG_04434 Pyrenophora tritici repentis PTRG_04434 N 0.944
AB03792.1 Alternaria brassicicola AB03792.1 N 0.915
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.732
YALI0F14245g Yarrowia lipolytica YALI0F14245g N 0.732
estExt_Genewise1Plus.C_200094 Postia placenta estExt_Genewise1Plus.C_200094 N 0.718
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.718
e_gw1.87.91.1 Postia placenta e_gw1.87.91.1 N 0.718
e_gw1.1.503.1 Phycomyces blakesleeanus e_gw1.1.503.1 N 0.704
augustus-scaffold_1.g441 Schizophyllum commune augustus-scaffold_1.g441 N 0.704
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.704
gwEuk.5.447.1 Ostreococcus lucimarinus gwEuk.5.447.1 N 0.704
estExt_fgenesh2_kg.C_71062 Serpula lacrymans estExt_fgenesh2_kg.C_71062 N 0.704
fgeneshTM_pg.1_#_1063 Tremella mesenterica fgeneshTM_pg.1_#_1063 N 0.704
DEHA0A05764g Debaryomyces hansenii DEHA0A05764g N 0.704