augustus-scaffold_1.g441 (Schizophyllum commune)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 augustus-scaffold_1.g441 T49078_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
augustus-scaffold_1.g441 RRM 191 261

Links

Other RRM family RBPs
Other Schizophyllum commune RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_kg.C_71062 Serpula lacrymans estExt_fgenesh2_kg.C_71062 N 0.887
genemark.9207_g Pleurotus ostreatus genemark.9207_g N 0.887
estExt_Genewise1Plus.C_30445 Agaricus bisporus estExt_Genewise1Plus.C_30445 N 0.887
eu2.Lbscf0011g04470 Laccaria bicolor eu2.Lbscf0011g04470 N 0.859
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.859
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.845
estExt_Genewise1Plus.C_200094 Postia placenta estExt_Genewise1Plus.C_200094 N 0.831
e_gw1.87.91.1 Postia placenta e_gw1.87.91.1 N 0.831
gw1.11.934.1 Heterobasidion annosum gw1.11.934.1 N 0.817
EDP41651.1 Malassezia globosa EDP41651.1 N 0.746
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.746
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.746
NFIA_109800 Neosartorya fischeri CADNFIAG00009499 N 0.732
ANIA_04346 Aspergillus nidulans CADANIAG00006114 N 0.732
An04g00680 Aspergillus niger CADANGAG00003776 N 0.732
PABG_04180 Paracoccidioides brasiliensis PABG_04180 N 0.732
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.732
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.732
fgenesh1_pg.C_scaffold_1000567 Sporobolomyces roseus fgenesh1_pg.C_scaffold_1000567 N 0.732
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.732
TEQG_06916 Trichophyton equinum TEQG_06916 N 0.718
VDAG_06981 Verticillium dahliae VDAG_06981 N 0.718
TERG_07689 Trichophyton rubrum TERG_07689 N 0.718
TESG_01475 Trichophyton tonsurans TESG_01475 N 0.718
VDBG_05329 Verticillium albo atrum VDBG_05329 N 0.718
AFLA_113610 Aspergillus flavus CADAFLAG00005095 N 0.718
TRV_00034 Trichophyton verrucosum TRV_00034 N 0.718
YALI0F14245g Yarrowia lipolytica YALI0F14245g N 0.718
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.718
estExt_fgenesh2_pg.C_120136 Selaginella moellendorfii estExt_fgenesh2_pg.C_120136 N 0.718
PMAA_027560 Penicillium marneffei PMAA_027560 N 0.718
ACLA_045660 Aspergillus clavatus CADACLAG00004652 N 0.718
ARB_01674 Arthroderma benhamiae ARB_01674 N 0.718
AO090023000955 Aspergillus oryzae CADAORAG00008034 N 0.718
CIMG_04180 Coccidioides immitis CIMG_04180 N 0.704
Pc22g17020 Penicillium chrysogenum Pc22g17020 N 0.704
estExt_fgenesh1_pg.C_130152 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_130152 N 0.704
CPSG_03082 Coccidioides posadasii CPSG_03082 N 0.704
MCYG_01275 Microsporum canis MCYG_01275 N 0.704
SOCG_03680 Schizosaccharomyces octosporus SOCG_03680 N 0.704
PTRG_04434 Pyrenophora tritici repentis PTRG_04434 N 0.704
UM03939 Ustilago maydis UM03939 N 0.704