YALI0F14245g (Yarrowia lipolytica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 YALI0F14245g T59355_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
YALI0F14245g RRM 105 175

Links

Other RRM family RBPs
Other Yarrowia lipolytica RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.831
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.803
TERG_07689 Trichophyton rubrum TERG_07689 N 0.775
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.775
TEQG_06916 Trichophyton equinum TEQG_06916 N 0.775
TRV_00034 Trichophyton verrucosum TRV_00034 N 0.775
TESG_01475 Trichophyton tonsurans TESG_01475 N 0.775
ARB_01674 Arthroderma benhamiae ARB_01674 N 0.775
DEHA0A05764g Debaryomyces hansenii DEHA0A05764g N 0.775
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.761
MGYG_01823 Microsporum gypseum MGYG_01823 N 0.761
e_gw1.35.197.1 Physcomitrella patens e_gw1.35.197.1 N 0.746
gw1.198.122.1 Physcomitrella patens gw1.198.122.1 N 0.746
estExt_Genewise1Plus.C_200094 Postia placenta estExt_Genewise1Plus.C_200094 N 0.746
PMAA_027560 Penicillium marneffei PMAA_027560 N 0.746
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.746
fgenesh1_pg.C_scaffold_1000567 Sporobolomyces roseus fgenesh1_pg.C_scaffold_1000567 N 0.746
e_gw1.87.91.1 Postia placenta e_gw1.87.91.1 N 0.746
AO090023000955 Aspergillus oryzae CADAORAG00008034 N 0.732
estExt_fgenesh1_pg.C_130152 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_130152 N 0.732
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.732
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.732
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.732
PTRG_04434 Pyrenophora tritici repentis PTRG_04434 N 0.732
PABG_04180 Paracoccidioides brasiliensis PABG_04180 N 0.732
An04g00680 Aspergillus niger CADANGAG00003776 N 0.732
ACLA_045660 Aspergillus clavatus CADACLAG00004652 N 0.732
AFLA_113610 Aspergillus flavus CADAFLAG00005095 N 0.732
MCYG_01275 Microsporum canis MCYG_01275 N 0.732
AB03792.1 Alternaria brassicicola AB03792.1 N 0.718
estExt_Genewise1Plus.C_30445 Agaricus bisporus estExt_Genewise1Plus.C_30445 N 0.718
estExt_fgenesh2_kg.C_71062 Serpula lacrymans estExt_fgenesh2_kg.C_71062 N 0.718
ANIA_04346 Aspergillus nidulans CADANIAG00006114 N 0.718
augustus-scaffold_1.g441 Schizophyllum commune augustus-scaffold_1.g441 N 0.718
NFIA_109800 Neosartorya fischeri CADNFIAG00009499 N 0.718
CPSG_03082 Coccidioides posadasii CPSG_03082 N 0.704
CIMG_04180 Coccidioides immitis CIMG_04180 N 0.704
BDBG_06195 Blastomyces dermatitidis BDBG_06195 N 0.704
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.704
SS1G_03893 Sclerotinia sclerotiorum SS1G_03893 N 0.704
estExt_fgenesh2_pg.C_120136 Selaginella moellendorfii estExt_fgenesh2_pg.C_120136 N 0.704
estExt_Genewise1Plus.C_61440 Thielavia terrestris estExt_Genewise1Plus.C_61440 N 0.704
estExt_fgenesh1_pg.C_90140 Trichoderma atroviride estExt_fgenesh1_pg.C_90140 N 0.704