PTRG_04434 (Pyrenophora tritici repentis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PTRG_04434 T30215_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PTRT_04434 RRM 259 329

Links

Other RRM family RBPs
Other Pyrenophora tritici repentis RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pg.C_130152 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_130152 N 0.944
AB03792.1 Alternaria brassicicola AB03792.1 N 0.930
estExt_fgenesh2_kg.C_71062 Serpula lacrymans estExt_fgenesh2_kg.C_71062 N 0.732
YALI0F14245g Yarrowia lipolytica YALI0F14245g N 0.732
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.718
estExt_Genewise1Plus.C_200094 Postia placenta estExt_Genewise1Plus.C_200094 N 0.718
e_gw1.87.91.1 Postia placenta e_gw1.87.91.1 N 0.718
VDBG_05329 Verticillium albo atrum VDBG_05329 N 0.704
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.704
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.704
e_gw1.1.503.1 Phycomyces blakesleeanus e_gw1.1.503.1 N 0.704
fgenesh1_pg.C_scaffold_1000567 Sporobolomyces roseus fgenesh1_pg.C_scaffold_1000567 N 0.704
VDAG_06981 Verticillium dahliae VDAG_06981 N 0.704
augustus-scaffold_1.g441 Schizophyllum commune augustus-scaffold_1.g441 N 0.704