estExt_fgeneshPB_pg.C_20804 (Phycomyces blakesleeanus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgeneshPB_pg.C_20804 T51125_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgeneshPB_pg.C_20804 RRM 11 81

Links

Other RRM family RBPs
Other Phycomyces blakesleeanus RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RO3G_14170 Rhizopus oryzae RO3G_14170 N 0.873
e_gw1.7.481.1 Mucor circinelloides e_gw1.7.481.1 N 0.831
SPPG_01899 Spizellomyces punctatus SPPG_01899 N 0.831
e_gw.65.105.1 Branchiostoma floridae e_gw.65.105.1 N 0.718
fgenesh1_pm.C_scaffold_1000789 Pleurotus ostreatus fgenesh1_pm.C_scaffold_1000789 N 0.718
ISCW015573 Ixodes scapularis ISCW015573 N 0.718
e_gw.65.110.1 Branchiostoma floridae e_gw.65.110.1 N 0.718
CSTF2 Oryctolagus cuniculus ENSOCUG00000010468 N 0.704
ENSPPYG00000020541 Pongo pygmaeus ENSPPYG00000020541 N 0.704
Cstf2 Mus musculus ENSMUSG00000031256 N 0.704
CSTF2 Macaca mulatta ENSMMUG00000013008 N 0.704
CSTF2 Myotis lucifugus ENSMLUG00000004598 N 0.704
CSTF2 Pan troglodytes ENSPTRG00000022090 N 0.704
ENSMODG00000011785 Monodelphis domestica ENSMODG00000011785 N 0.704
cstf2 Xenopus tropicalis ENSXETG00000009642 N 0.704
28644.m000926 Ricinus communis 28644.m000926 N 0.704
e_gw.312.28.1 Nematostella vectensis e_gw.312.28.1 N 0.704
CSTF2 Microcebus murinus ENSMICG00000014121 N 0.704
CSTF2 Tursiops truncatus ENSTTRG00000013556 N 0.704
CSTF2 Taeniopygia guttata ENSTGUG00000002253 N 0.704
CSTF2 Sus scrofa ENSSSCG00000012486 N 0.704
CSTF2 Loxodonta africana ENSLAFG00000000474 N 0.704
nasonia_NCBI_hmm235054 Nasonia vitripennis nasonia_NCBI_hmm235054 N 0.704
ENSACAG00000004388 Anolis carolinensis ENSACAG00000004388 N 0.704
CSTF2_BOVIN Bos taurus ENSBTAG00000003547 N 0.704
amel4_ncbi_hmm3649 Apis mellifera amel4_ncbi_hmm3649 N 0.704
AAH80037 Xenopus laevis AAH80037 N 0.704
BGIBMGA006476 Bombyx mori BGIBMGA006476 N 0.704
AAB50269 Xenopus laevis AAB50269 N 0.704
AAH41291 Xenopus laevis AAH41291 N 0.704
CSTF2 Canis familiaris ENSCAFG00000017551 N 0.704
CSTF2 Callithrix jacchus ENSCJAG00000004422 N 0.704
CSTF2 Gorilla gorilla ENSGGOG00000022267 N 0.704
gw1.20.80.1 Selaginella moellendorfii gw1.20.80.1 N 0.704
ENSMEUG00000007875 Macropus eugenii ENSMEUG00000007875 N 0.704
Q5ZLS0_CHICK Gallus gallus ENSGALG00000006760 N 0.704
CSTF2 Homo sapiens ENSG00000101811 N 0.704
CSTF2 Cavia porcellus ENSCPOG00000015255 N 0.704
CSTF2 Felis catus ENSFCAG00000007000 N 0.704
ENSMEUG00000011186 Macropus eugenii ENSMEUG00000011186 N 0.704