fgenesh1_pm.C_scaffold_1000789 (Pleurotus ostreatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.C_scaffold_1000789 T56593_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_1000789 RRM 5 75

Links

Other RRM family RBPs
Other Pleurotus ostreatus RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh2_pm.C_scaffold_8000201 Heterobasidion annosum fgenesh2_pm.C_scaffold_8000201 N 0.915
estExt_Genewise1_worm.C_70120 Laccaria bicolor estExt_Genewise1_worm.C_70120 N 0.915
estExt_Genewise1.C_230050 Postia placenta estExt_Genewise1.C_230050 N 0.887
estExt_fgenesh2_kg.C_100155 Agaricus bisporus estExt_fgenesh2_kg.C_100155 N 0.887
estExt_fgenesh2_pg.C_60367 Schizophyllum commune estExt_fgenesh2_pg.C_60367 N 0.789
UM02881 Ustilago maydis UM02881 N 0.775
SPPG_01899 Spizellomyces punctatus SPPG_01899 N 0.761
estExt_fgeneshPB_pg.C_20804 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_20804 N 0.718
ISCW015573 Ixodes scapularis ISCW015573 N 0.704
RO3G_14170 Rhizopus oryzae RO3G_14170 N 0.704