RO3G_14170 (Rhizopus oryzae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 RO3G_14170 T30498_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
RO3T_14169 RRM 11 81

Links

Other RRM family RBPs
Other Rhizopus oryzae RBPs

73 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.7.481.1 Mucor circinelloides e_gw1.7.481.1 N 0.958
estExt_fgeneshPB_pg.C_20804 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_20804 N 0.873
SPPG_01899 Spizellomyces punctatus SPPG_01899 N 0.803
e_gw.312.28.1 Nematostella vectensis e_gw.312.28.1 N 0.761
Glyma10g36350.1 Glycine max Glyma10g36350.1 N 0.732
amel4_ncbi_hmm3649 Apis mellifera amel4_ncbi_hmm3649 N 0.732
ppa004010m Prunus persica ppa004010m N 0.732
UM02881 Ustilago maydis UM02881 N 0.732
LjSGA_018671.1 Lotus japonicus LjSGA_018671.1 N 0.732
PK22244.1 Cannabis sativa PK22244.1 N 0.732
Glyma20g31220.1 Glycine max Glyma20g31220.1 N 0.732
nasonia_NCBI_hmm235054 Nasonia vitripennis nasonia_NCBI_hmm235054 N 0.732
BGIBMGA006476 Bombyx mori BGIBMGA006476 N 0.732
Cucsa.364140 Cucumis sativus Cucsa.364140 N 0.732
estExt_Genewise1.C_550102 Capitella teleta estExt_Genewise1.C_550102 N 0.718
e_gw.65.110.1 Branchiostoma floridae e_gw.65.110.1 N 0.718
GSVIVG00013670001 Vitis vinifera GSVIVG00013670001 N 0.718
28644.m000926 Ricinus communis 28644.m000926 N 0.718
mgf002767m Mimulus guttatus mgf002767m N 0.718
e_gw.65.105.1 Branchiostoma floridae e_gw.65.105.1 N 0.718
estExt_Genewise1.C_230050 Postia placenta estExt_Genewise1.C_230050 N 0.718
mgf012202m Mimulus guttatus mgf012202m N 0.718
CSTF64 Arabidopsis thaliana AT1G71800-TAIR-G N 0.718
DGIL_AUG5s2502g11t1 Acyrtosiphon pisum DGIL_AUG5s2502g11t1 N 0.718
DGIL_AUG5s12011g4t1 Acyrtosiphon pisum DGIL_AUG5s12011g4t1 N 0.718
MDP0000283046 Malus x domestica MDP0000283046 N 0.718
XM_002887343.1 Arabidopsis lyrata Al_scaffold_0002_1857 N 0.718
MDP0000142436 Malus x domestica MDP0000142436 N 0.718
GK14167 Drosophila willistoni FBgn0216173 N 0.704
fgenesh1_pm.C_scaffold_1000789 Pleurotus ostreatus fgenesh1_pm.C_scaffold_1000789 N 0.704
GJ10336 Drosophila virilis FBgn0197622 N 0.704
GE25546 Drosophila yakuba FBgn0242611 N 0.704
GD19237 Drosophila simulans FBgn0190742 N 0.704
GM17877 Drosophila sechellia FBgn0172784 N 0.704
PHUM441150 Pediculus humanus PHUM441150 N 0.704
AAH80037 Xenopus laevis AAH80037 N 0.704
AAH41291 Xenopus laevis AAH41291 N 0.704
GL24357 Drosophila persimilis FBgn0161947 N 0.704
CpipJ_CPIJ012662 Culex pipiens CpipJ_CPIJ012662 N 0.704
AAB50269 Xenopus laevis AAB50269 N 0.704
GSTUMT00004863001 Tuber melanosporum GSTUMT00004863001 N 0.704
GA20525-RA Drosophila pseudoobscura FBgn0080519 N 0.704
Q5ZLS0_CHICK Gallus gallus ENSGALG00000006760 N 0.704
CSTF2 Homo sapiens ENSG00000101811 N 0.704
CSTF2 Gorilla gorilla ENSGGOG00000022267 N 0.704
CSTF2 Loxodonta africana ENSLAFG00000000474 N 0.704
ENSMEUG00000011186 Macropus eugenii ENSMEUG00000011186 N 0.704
ENSMEUG00000007875 Macropus eugenii ENSMEUG00000007875 N 0.704
CSTF2 Felis catus ENSFCAG00000007000 N 0.704
CSTF2 Cavia porcellus ENSCPOG00000015255 N 0.704
CPIJ012662 Culex quinquefasciatus CPIJ012662 N 0.704
AAEL013869 Aedes aegypti AAEL013869 N 0.704
ENSACAG00000004388 Anolis carolinensis ENSACAG00000004388 N 0.704
CSTF2_BOVIN Bos taurus ENSBTAG00000003547 N 0.704
CSTF2 Callithrix jacchus ENSCJAG00000004422 N 0.704
CSTF2 Canis familiaris ENSCAFG00000017551 N 0.704
CSTF2 Microcebus murinus ENSMICG00000014121 N 0.704
CSTF2 Myotis lucifugus ENSMLUG00000004598 N 0.704
cstf2 Xenopus tropicalis ENSXETG00000009642 N 0.704
CSTF2 Tursiops truncatus ENSTTRG00000013556 N 0.704
CstF-64 Drosophila melanogaster FBgn0027841 N 0.704
GF16912 Drosophila ananassae FBgn0093932 N 0.704
GH18352 Drosophila grimshawi FBgn0125820 N 0.704
GG22991 Drosophila erecta FBgn0115148 N 0.704
CSTF2 Taeniopygia guttata ENSTGUG00000002253 N 0.704
CSTF2 Sus scrofa ENSSSCG00000012486 N 0.704
ENSMODG00000011785 Monodelphis domestica ENSMODG00000011785 N 0.704
CSTF2 Macaca mulatta ENSMMUG00000013008 N 0.704
Cstf2 Mus musculus ENSMUSG00000031256 N 0.704
CSTF2 Oryctolagus cuniculus ENSOCUG00000010468 N 0.704
CSTF2 Pan troglodytes ENSPTRG00000022090 N 0.704
ENSPPYG00000020541 Pongo pygmaeus ENSPPYG00000020541 N 0.704
GI23336 Drosophila mojavensis FBgn0146063 N 0.704