UM02881 (Ustilago maydis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 UM02881 T31279_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
UM02881 RRM 11 81

Links

Other RRM family RBPs
Other Ustilago maydis RBPs

71 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pm.C_scaffold_1000789 Pleurotus ostreatus fgenesh1_pm.C_scaffold_1000789 N 0.775
estExt_Genewise1.C_230050 Postia placenta estExt_Genewise1.C_230050 N 0.775
estExt_fgenesh2_kg.C_100155 Agaricus bisporus estExt_fgenesh2_kg.C_100155 N 0.761
fgenesh2_pm.C_scaffold_8000201 Heterobasidion annosum fgenesh2_pm.C_scaffold_8000201 N 0.761
SPPG_01899 Spizellomyces punctatus SPPG_01899 N 0.761
estExt_Genewise1_worm.C_70120 Laccaria bicolor estExt_Genewise1_worm.C_70120 N 0.746
RO3G_14170 Rhizopus oryzae RO3G_14170 N 0.732
ENSSSCG00000010430 Sus scrofa ENSSSCG00000010430 N 0.718
CSTF2T Sorex araneus ENSSARG00000002013 N 0.718
D3ZKA4_RAT Rattus norvegicus ENSRNOG00000022436 N 0.718
ENSSSCG00000009884 Sus scrofa ENSSSCG00000009884 N 0.718
CSTF2 Sus scrofa ENSSSCG00000012486 N 0.718
CSTF2T Spermophilus tridecemlineatus ENSSTOG00000005624 N 0.718
CSTF2T Pan troglodytes ENSPTRG00000002510 N 0.718
ENSPPYG00000002441 Pongo pygmaeus ENSPPYG00000002441 N 0.718
ENSACAG00000004388 Anolis carolinensis ENSACAG00000004388 N 0.718
ENSPPYG00000020541 Pongo pygmaeus ENSPPYG00000020541 N 0.718
CSTF2 Taeniopygia guttata ENSTGUG00000002253 N 0.718
CSTF2 Pan troglodytes ENSPTRG00000022090 N 0.718
CSTF2T Pteropus vampyrus ENSPVAG00000006274 N 0.718
CSTF2 Tursiops truncatus ENSTTRG00000013556 N 0.718
Ame_R018612 Ailuropoda melanoleuca Ame_R018612 N 0.718
estExt_fgenesh2_pg.C_60367 Schizophyllum commune estExt_fgenesh2_pg.C_60367 N 0.718
AAB50269 Xenopus laevis AAB50269 N 0.718
AAH41291 Xenopus laevis AAH41291 N 0.718
AAH80037 Xenopus laevis AAH80037 N 0.718
28644.m000926 Ricinus communis 28644.m000926 N 0.718
ISCW015573 Ixodes scapularis ISCW015573 N 0.718
CSTF2 Takifugu rubripes ENSTRUG00000004323 N 0.718
CSTF2T Tursiops truncatus ENSTTRG00000003341 N 0.718
CSTF2 Oryzias latipes ENSORLG00000001380 N 0.718
cstf2 Xenopus tropicalis ENSXETG00000009642 N 0.718
CSTF2 Tetraodon nigroviridis ENSTNIG00000016860 N 0.718
CSTF2T Procavia capensis ENSPCAG00000000046 N 0.718
CSTF2T Felis catus ENSFCAG00000013011 N 0.718
CSTF2 Felis catus ENSFCAG00000007000 N 0.718
cstf2 Danio rerio ENSDARG00000044009 N 0.718
CSTF2 Homo sapiens ENSG00000101811 N 0.718
CSTF2T Homo sapiens ENSG00000177613 N 0.718
Q5ZLS0_CHICK Gallus gallus ENSGALG00000006760 N 0.718
CSTF2 Oryctolagus cuniculus ENSOCUG00000010468 N 0.718
CSTF2 Cavia porcellus ENSCPOG00000015255 N 0.718
ENSCPOG00000004195 Cavia porcellus ENSCPOG00000004195 N 0.718
CSTF2T Canis familiaris ENSCAFG00000015567 N 0.718
CSTF2_BOVIN Bos taurus ENSBTAG00000003547 N 0.718
CSTF2 Canis familiaris ENSCAFG00000017551 N 0.718
CSTF2T Choloepus hoffmanni ENSCHOG00000011888 N 0.718
CSTF2T Callithrix jacchus ENSCJAG00000005033 N 0.718
CSTF2 Callithrix jacchus ENSCJAG00000004422 N 0.718
ENSGGOG00000022117 Gorilla gorilla ENSGGOG00000022117 N 0.718
CSTF2 Gasterosteus aculeatus ENSGACG00000017326 N 0.718
CSTF2T Myotis lucifugus ENSMLUG00000011187 N 0.718
CSTF2 Myotis lucifugus ENSMLUG00000004598 N 0.718
CSTF2 Microcebus murinus ENSMICG00000014121 N 0.718
CSTF2T Macaca mulatta ENSMMUG00000010845 N 0.718
CSTF2 Macaca mulatta ENSMMUG00000013008 N 0.718
Cstf2t Mus musculus ENSMUSG00000053536 N 0.718
Cstf2 Mus musculus ENSMUSG00000031256 N 0.718
ENSMODG00000011785 Monodelphis domestica ENSMODG00000011785 N 0.718
CSTF2 Gorilla gorilla ENSGGOG00000022267 N 0.718
ENSMEUG00000011186 Macropus eugenii ENSMEUG00000011186 N 0.718
ENSGGOG00000026139 Gorilla gorilla ENSGGOG00000026139 N 0.718
CSTF2T Loxodonta africana ENSLAFG00000002058 N 0.718
ENSMEUG00000007875 Macropus eugenii ENSMEUG00000007875 N 0.718
CSTF2 Loxodonta africana ENSLAFG00000000474 N 0.718
CSTF2T Oryctolagus cuniculus ENSOCUG00000004647 N 0.704
e_gw.312.28.1 Nematostella vectensis e_gw.312.28.1 N 0.704
e_gw.65.110.1 Branchiostoma floridae e_gw.65.110.1 N 0.704
e_gw.65.105.1 Branchiostoma floridae e_gw.65.105.1 N 0.704
CSTF2 Equus caballus ENSECAG00000009325 N 0.704
e_gw1.7.481.1 Mucor circinelloides e_gw1.7.481.1 N 0.704