CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UREG_05919
(
Uncinocarpus reesii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
UREG_05919
T31361_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
URET_05919
RRM
34
107
VYVTSIPLDATIEEINDVFCKCGVIAEEIDSHRPRIKMYTDENGKFKGDALVVYFRPESVNLAIQMLDDSDFRL
URET_05919
RRM
197
252
KEDIRDECSKLGEVTNVVLYDKEESGVVTVRFKDPEAAQACVEMMNGRFFGGTKVE
Links
Other
RRM
family RBPs
Other
Uncinocarpus reesii
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPSG_09587
Coccidioides posadasii
CPSG_09587
N
0.931
CIMG_06929
Coccidioides immitis
CIMG_06929
N
0.931
TESG_05610
Trichophyton tonsurans
TESG_05610
N
0.846
TERG_07903
Trichophyton rubrum
TERG_07903
N
0.846
ACLA_024590
Aspergillus clavatus
CADACLAG00002524
N
0.838
MGYG_04491
Microsporum gypseum
MGYG_04491
N
0.838
ARB_02854
Arthroderma benhamiae
ARB_02854
N
0.838
ANIA_01188
Aspergillus nidulans
CADANIAG00001437
N
0.831
An08g03180
Aspergillus niger
CADANGAG00006637
N
0.823
MCYG_01582
Microsporum canis
MCYG_01582
N
0.823
e_gw1.00083.460.1
Aspergillus carbonarius
e_gw1.00083.460.1
N
0.823
NFIA_014720
Neosartorya fischeri
CADNFIAG00001794
N
0.815
AFLA_068630
Aspergillus flavus
CADAFLAG00008287
N
0.815
AFUA_1G10920
Aspergillus fumigatus
CADAFUAG00007692
N
0.815
AO090038000318
Aspergillus oryzae
CADAORAG00009105
N
0.815
ATEG_00286
Aspergillus terreus
CADATEAG00009538
N
0.808
PMAA_042630
Penicillium marneffei
PMAA_042630
N
0.800
HCAG_01782
Histoplasma capsulatum
HCAG_01782
N
0.800
BDBG_00241
Blastomyces dermatitidis
BDBG_00241
N
0.792
PABG_00485
Paracoccidioides brasiliensis
PABG_00485
N
0.777
TRV_05547
Trichophyton verrucosum
TRV_05547
N
0.738
GSTUMT00002378001
Tuber melanosporum
GSTUMT00002378001
N
0.700