MDP0000223003 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000223003 T57453_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000223003 RRM 206 273
MDP0000223003 RRM 310 355

Links

Other RRM family RBPs
Other Malus x domestica RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000233630 Malus x domestica MDP0000233630 N 0.766
ppa006808m Prunus persica ppa006808m N 0.766
PK04894.1 Cannabis sativa PK04894.1 N 0.745
Glyma06g14030.1 Glycine max Glyma06g14030.1 N 0.730
GSVIVG00019674001 Vitis vinifera GSVIVG00019674001 N 0.730
Medtr3g122880 Medicago truncatula Medtr3g122880 N 0.723
PK12463.1 Cannabis sativa PK12463.1 N 0.723
cassava43127.valid.m1 Manihot esculenta cassava43127.valid.m1 N 0.723
GRMZM2G069102 Zea mays GRMZM2G069102 N 0.723
30068.m002593 Ricinus communis 30068.m002593 N 0.715
mgf012896m Mimulus guttatus mgf012896m N 0.715
e_gw1.62.48.1 Physcomitrella patens e_gw1.62.48.1 N 0.708
Glyma04g40750.1 Glycine max Glyma04g40750.1 N 0.708
Glyma04g40760.1 Glycine max Glyma04g40760.1 N 0.708
estExt_Genewise1.C_1960042 Physcomitrella patens estExt_Genewise1.C_1960042 N 0.708
29485.m000140 Ricinus communis 29485.m000140 N 0.708
GRMZM2G173428 Zea mays GRMZM2G173428 N 0.708
GSVIVG00038633001 Vitis vinifera GSVIVG00038633001 N 0.708
SB07G001560 Sorghum bicolor Sb07g001560 N 0.708
Glyma06g14050.1 Glycine max Glyma06g14050.1 N 0.708
mgf013366m Mimulus guttatus mgf013366m N 0.708
cassava38064.valid.m1 Manihot esculenta cassava38064.valid.m1 N 0.701
CID11 Arabidopsis thaliana AT1G32790-TAIR-G N 0.701
XM_002893696.1 Arabidopsis lyrata fgenesh2_kg.1__3419__AT1G32790.2 N 0.701
XM_002872481.1 Arabidopsis lyrata fgenesh2_kg.6__3042__AT4G10610.1 N 0.701
cassava38063.valid.m1 Manihot esculenta cassava38063.valid.m1 N 0.701
cassava38065.valid.m1 Manihot esculenta cassava38065.valid.m1 N 0.701