Glyma04g40750.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma04g40750.1 T52649_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma04g40750.1 RRM 186 253
Glyma04g40750.1 RRM 283 351

Links

Other RRM family RBPs
Other Glycine max RBPs

80 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma06g14050.1 Glycine max Glyma06g14050.1 N 0.985
Glyma06g14030.1 Glycine max Glyma06g14030.1 N 0.964
Glyma04g40760.1 Glycine max Glyma04g40760.1 N 0.956
Medtr3g122880 Medicago truncatula Medtr3g122880 N 0.949
Medtr3g122920 Medicago truncatula Medtr3g122920 N 0.949
PK04894.1 Cannabis sativa PK04894.1 N 0.905
ppa006808m Prunus persica ppa006808m N 0.905
GSVIVG00038633001 Vitis vinifera GSVIVG00038633001 N 0.898
estExt_Genewise1.C_1960042 Physcomitrella patens estExt_Genewise1.C_1960042 N 0.883
GSVIVG00019674001 Vitis vinifera GSVIVG00019674001 N 0.883
e_gw1.62.48.1 Physcomitrella patens e_gw1.62.48.1 N 0.883
MDP0000233630 Malus x domestica MDP0000233630 N 0.876
LOC_Os08g02330 Oryza sativa LOC_Os08g02330 N 0.869
cassava43127.valid.m1 Manihot esculenta cassava43127.valid.m1 N 0.869
SB07G001560 Sorghum bicolor Sb07g001560 N 0.869
BGIOSIBCE026288 Oryza indica BGIOSIBCE026288 N 0.869
gw1.29.636.1 Selaginella moellendorfii gw1.29.636.1 N 0.869
gw1.10.957.1 Selaginella moellendorfii gw1.10.957.1 N 0.869
mgf012896m Mimulus guttatus mgf012896m N 0.869
GRMZM2G173428 Zea mays GRMZM2G173428 N 0.869
PK12463.1 Cannabis sativa PK12463.1 N 0.861
30068.m002593 Ricinus communis 30068.m002593 N 0.861
GRMZM2G069102 Zea mays GRMZM2G069102 N 0.854
BRADI3G13740 Brachypodium distachyon BRADI3G13740 N 0.847
XM_002872481.1 Arabidopsis lyrata fgenesh2_kg.6__3042__AT4G10610.1 N 0.839
29485.m000140 Ricinus communis 29485.m000140 N 0.839
mgf013366m Mimulus guttatus mgf013366m N 0.839
cassava37979.valid.m1 Manihot esculenta cassava37979.valid.m1 N 0.839
cassava41363.m1 Manihot esculenta cassava41363.m1 N 0.839
cassava41364.m1 Manihot esculenta cassava41364.m1 N 0.839
cassava37978.valid.m1 Manihot esculenta cassava37978.valid.m1 N 0.839
cassava38065.valid.m1 Manihot esculenta cassava38065.valid.m1 N 0.832
cassava38064.valid.m1 Manihot esculenta cassava38064.valid.m1 N 0.832
cassava38063.valid.m1 Manihot esculenta cassava38063.valid.m1 N 0.832
Cucsa.273320 Cucumis sativus Cucsa.273320 N 0.825
CID11 Arabidopsis thaliana AT1G32790-TAIR-G N 0.825
XM_002893696.1 Arabidopsis lyrata fgenesh2_kg.1__3419__AT1G32790.2 N 0.825
ATRBP37 Arabidopsis thaliana AT4G10610-TAIR-G N 0.818
XM_002877626.1 Arabidopsis lyrata fgenesh2_kg.5__1290__AT3G49390.2 N 0.803
CID10 Arabidopsis thaliana AT3G49390-TAIR-G N 0.803
GSVIVG00001961001 Vitis vinifera GSVIVG00001961001 N 0.796
cassava23841.valid.m1 Manihot esculenta cassava23841.valid.m1 N 0.796
LjT41H24.20.nd Lotus japonicus LjT41H24.20.nd N 0.788
chr3.LjT02L14.110.nd Lotus japonicus chr3.LjT02L14.110.nd N 0.781
ppa009298m Prunus persica ppa009298m N 0.781
CID9 Arabidopsis thaliana AT3G14450-TAIR-G N 0.774
PDK_20s1822231g001 Phoenix dactylifera PDK_20s1822231g001 N 0.774
GRMZM2G349794 Zea mays GRMZM2G349794 N 0.774
29650.m000268 Ricinus communis 29650.m000268 N 0.774
PK28889.1 Cannabis sativa PK28889.1 N 0.774
XM_002894411.1 Arabidopsis lyrata Al_scaffold_0001_4812 N 0.774
Glyma08g18810.1 Glycine max Glyma08g18810.1 N 0.774
XM_002882834.1 Arabidopsis lyrata fgenesh2_kg.3__1570__AT3G14450.1 N 0.774
chr3.CM0059.50.nd Lotus japonicus chr3.CM0059.50.nd N 0.766
CID8 Arabidopsis thaliana AT1G53650-TAIR-G N 0.766
Glyma15g40060.1 Glycine max Glyma15g40060.1 N 0.766
LOC_Os01g11120 Oryza sativa LOC_Os01g11120 N 0.759
Sb04g008740 Sorghum bicolor Sb04g008740 N 0.752
BRADI2G06650 Brachypodium distachyon BRADI2G06650 N 0.752
B9IDI5_POPTR Populus trichocarpa POPTR_0015s00770 N 0.752
BGIOSIBCE006292 Oryza indica BGIOSIBCE006292 N 0.745
LOC_Os02g14760 Oryza sativa LOC_Os02g14760 N 0.745
mgf005336m Mimulus guttatus mgf005336m N 0.745
BRADI1G39150 Brachypodium distachyon BRADI1G39150 N 0.737
BRADI3G09250 Brachypodium distachyon BRADI3G09250 N 0.737
POPTR_0012s02890 Populus trichocarpa POPTR_0012s02890 N 0.737
LOC_Os06g35030 Oryza sativa LOC_Os06g35030 N 0.730
mgf014445m Mimulus guttatus mgf014445m N 0.730
CID13 Arabidopsis thaliana AT5G24440-TAIR-G N 0.730
XM_002874153.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001957 N 0.723
SB03G002180 Sorghum bicolor Sb03g002180 N 0.715
B9GIT2_POPTR Populus trichocarpa POPTR_0001s45290 N 0.715
GRMZM2G029058 Zea mays GRMZM2G029058 N 0.715
BGIOSIBCE022210 Oryza indica BGIOSIBCE022210 N 0.715
GRMZM2G051043 Zea mays GRMZM2G051043 N 0.715
GRMZM2G069816 Zea mays GRMZM2G069816 N 0.708
MDP0000223003 Malus x domestica MDP0000223003 N 0.708
Cucsa.071470 Cucumis sativus Cucsa.071470 N 0.703
cassava45236.m1 Manihot esculenta cassava45236.m1 N 0.701
SB10G021290 Sorghum bicolor Sb10g021290 N 0.701