PDK_20s1371981g001 (Phoenix dactylifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PDK_20s1371981g001 T58107_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1371981g001 RRM 23 93
PDK_20s1371981g001 RRM 111 182

Links

Other RRM family RBPs
Other Phoenix dactylifera RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SB03G027920 Sorghum bicolor Sb03g027920 N 0.771
LOC_Os08g23120 Oryza sativa LOC_Os08g23120 N 0.764
BGIOSIBCE027406 Oryza indica BGIOSIBCE027406 N 0.764
BRADI3G20700 Brachypodium distachyon BRADI3G20700 N 0.750
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.722
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.708
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.701
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.701
ppa007812m Prunus persica ppa007812m N 0.701