ppa007812m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa007812m T58392_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa007812m RRM 21 89
ppa007812m RRM 109 179

Links

Other RRM family RBPs
Other Prunus persica RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000908645 Malus x domestica MDP0000908645 N 0.886
MDP0000288646 Malus x domestica MDP0000288646 N 0.886
Glyma13g11650.1 Glycine max Glyma13g11650.1 N 0.850
mgf019396m Mimulus guttatus mgf019396m N 0.850
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.843
GSVIVG00030120001 Vitis vinifera GSVIVG00030120001 N 0.821
Medtr3g106660 Medicago truncatula Medtr3g106660 N 0.814
MDP0000202850 Malus x domestica MDP0000202850 N 0.793
ppa006963m Prunus persica ppa006963m N 0.793
MDP0000220851 Malus x domestica MDP0000220851 N 0.793
MDP0000191633 Malus x domestica MDP0000191633 N 0.793
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.786
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.779
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.779
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.771
29629.m001425 Ricinus communis 29629.m001425 N 0.771
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.771
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.764
PK22392.1 Cannabis sativa PK22392.1 N 0.750
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.743
BGIOSIBCE027406 Oryza indica BGIOSIBCE027406 N 0.730
LOC_Os08g23120 Oryza sativa LOC_Os08g23120 N 0.730
XM_002882764.1 Arabidopsis lyrata fgenesh2_kg.3__1405__AT3G13224.1 N 0.729
ppa007179m Prunus persica ppa007179m N 0.729
29917.m002004 Ricinus communis 29917.m002004 N 0.721
B9GI65_POPTR Populus trichocarpa POPTR_0001s35360 N 0.714
PK13311.1 Cannabis sativa PK13311.1 N 0.714
cassava897.valid.m1 Manihot esculenta cassava897.valid.m1 N 0.714
SB03G027920 Sorghum bicolor Sb03g027920 N 0.709
BRADI3G20700 Brachypodium distachyon BRADI3G20700 N 0.702
PDK_20s1371981g001 Phoenix dactylifera PDK_20s1371981g001 N 0.701
Cucsa.340040 Cucumis sativus Cucsa.340040 N 0.700
GSVIVG00032402001 Vitis vinifera GSVIVG00032402001 N 0.700
Glyma19g00530.1 Glycine max Glyma19g00530.1 N 0.700
MDP0000303054 Malus x domestica MDP0000303054 N 0.700
MDP0000270712 Malus x domestica MDP0000270712 N 0.700