Smp_002550 (Schistosoma mansoni)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Smp_002550 T58596_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM8A
M054_0.6 		Homo sapiens RYGCGCB RNAcompete
Ray et al.(2013)
RNCMPT00056 		0.761
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Smp_002550.1 RRM 73 143
Smp_002550.2 RRM 39 109

Links

Other RRM family RBPs
Other Schistosoma mansoni RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Sjc_0039250 Schistosoma japonicum Sjc_0039250 I 0.958
RBM8A Macropus eugenii ENSMEUG00000016058 I 0.761
ENSLAFG00000021886 Loxodonta africana ENSLAFG00000021886 I 0.761
RBM8A Pan troglodytes ENSPTRG00000001201 I 0.761
RBM8A Homo sapiens ENSG00000131795 D 0.761
RBM8A Macaca mulatta ENSMMUG00000016051 I 0.761
RBM8A Gorilla gorilla ENSGGOG00000005422 I 0.761
Rbm8a Mus musculus ENSMUSG00000038374 I 0.761
ENSPPYG00000000929 Pongo pygmaeus ENSPPYG00000000929 I 0.761
RBM8A Otolemur garnettii ENSOGAG00000000202 I 0.761
RBM8A Oryctolagus cuniculus ENSOCUG00000025693 I 0.761
B020018G12Rik Mus musculus ENSMUSG00000078184 I 0.761
RBM8A Felis catus ENSFCAG00000005412 I 0.761
ENSETEG00000017932 Echinops telfairi ENSETEG00000017932 I 0.761
RBM8A Sorex araneus ENSSARG00000013289 I 0.761
Rbm8a Rattus norvegicus ENSRNOG00000021215 I 0.761
RBM8A Sus scrofa ENSSSCG00000006684 I 0.761
RBM8A Tursiops truncatus ENSTTRG00000009081 I 0.761
Ame_R013073 Ailuropoda melanoleuca Ame_R013073 I 0.761
RBM8A_BOVIN Bos taurus ENSBTAG00000008369 I 0.761
RBM8A Canis familiaris ENSCAFG00000023172 I 0.761
Q6DTK7_HORSE Equus caballus ENSECAG00000022024 I 0.761
RBM8A Pteropus vampyrus ENSPVAG00000014471 I 0.761
RBM8A Cavia porcellus ENSCPOG00000022453 I 0.761
LOC100399389 Callithrix jacchus ENSCJAG00000002209 I 0.761
ENSPCAG00000002146 Procavia capensis ENSPCAG00000002146 I 0.746
RBM8A Monodelphis domestica ENSMODG00000018752 I 0.746
rbm8a Danio rerio ENSDARG00000016516 I 0.746
RBM8A Spermophilus tridecemlineatus ENSSTOG00000013917 I 0.732
AAH73361 Xenopus laevis AAH73361 I 0.732
estExt_Genewise1.C_210127 Daphnia pulex estExt_Genewise1.C_210127 I 0.732
AAH56659 Xenopus laevis AAH56659 I 0.732
Q6PH90 Xenopus laevis Q6PH90 I 0.732
AAG27092 Xenopus laevis AAG27092 I 0.732
Q9DF42 Xenopus laevis Q9DF42 I 0.732
RBM8A Gasterosteus aculeatus ENSGACG00000013157 I 0.718
RBM8A Tetraodon nigroviridis ENSTNIG00000006869 I 0.718
Q8JJC6_ORYLA Oryzias latipes ENSORLG00000016263 I 0.718
RBM8A Takifugu rubripes ENSTRUG00000013173 I 0.718
B5FZD1_TAEGU Taeniopygia guttata ENSTGUG00000004447 I 0.704
AGAP006365 Anopheles gambiae AGAP006365 I 0.704
e_gw1.53.304.1 Lottia gigantea e_gw1.53.304.1 I 0.704