RBM8A (Gasterosteus aculeatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGACG00000013157 T37503_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM8A
M054_0.6 		Homo sapiens RYGCGCB RNAcompete
Ray et al.(2013)
RNCMPT00056 		0.915
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000017412 RRM 57 127

Links

Other RRM family RBPs
Other Gasterosteus aculeatus RBPs

62 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q8JJC6_ORYLA Oryzias latipes ENSORLG00000016263 I 0.972
RBM8A Takifugu rubripes ENSTRUG00000013173 I 0.972
RBM8A Macropus eugenii ENSMEUG00000016058 I 0.958
RBM8A Tetraodon nigroviridis ENSTNIG00000006869 I 0.958
rbm8a Danio rerio ENSDARG00000016516 I 0.930
RBM8A Monodelphis domestica ENSMODG00000018752 I 0.930
RBM8A Homo sapiens ENSG00000131795 D 0.915
RBM8A Tursiops truncatus ENSTTRG00000009081 I 0.915
Ame_R013073 Ailuropoda melanoleuca Ame_R013073 I 0.915
LOC100399389 Callithrix jacchus ENSCJAG00000002209 I 0.915
RBM8A_BOVIN Bos taurus ENSBTAG00000008369 I 0.915
ENSETEG00000017932 Echinops telfairi ENSETEG00000017932 I 0.915
RBM8A Cavia porcellus ENSCPOG00000022453 I 0.915
Q6DTK7_HORSE Equus caballus ENSECAG00000022024 I 0.915
RBM8A Sus scrofa ENSSSCG00000006684 I 0.915
RBM8A Canis familiaris ENSCAFG00000023172 I 0.915
Rbm8a Rattus norvegicus ENSRNOG00000021215 I 0.915
B020018G12Rik Mus musculus ENSMUSG00000078184 I 0.915
RBM8A Oryctolagus cuniculus ENSOCUG00000025693 I 0.915
Rbm8a Mus musculus ENSMUSG00000038374 I 0.915
RBM8A Macaca mulatta ENSMMUG00000016051 I 0.915
ENSLAFG00000021886 Loxodonta africana ENSLAFG00000021886 I 0.915
RBM8A Sorex araneus ENSSARG00000013289 I 0.915
RBM8A Otolemur garnettii ENSOGAG00000000202 I 0.915
RBM8A Gorilla gorilla ENSGGOG00000005422 I 0.915
RBM8A Pteropus vampyrus ENSPVAG00000014471 I 0.915
RBM8A Pan troglodytes ENSPTRG00000001201 I 0.915
RBM8A Felis catus ENSFCAG00000005412 I 0.915
ENSPPYG00000000929 Pongo pygmaeus ENSPPYG00000000929 I 0.915
Q6PH90 Xenopus laevis Q6PH90 I 0.901
AAH56659 Xenopus laevis AAH56659 I 0.901
ENSPCAG00000002146 Procavia capensis ENSPCAG00000002146 I 0.901
AAH73361 Xenopus laevis AAH73361 I 0.901
AAG27092 Xenopus laevis AAG27092 I 0.901
Q9DF42 Xenopus laevis Q9DF42 I 0.901
RBM8A Spermophilus tridecemlineatus ENSSTOG00000013917 I 0.873
B5FZD1_TAEGU Taeniopygia guttata ENSTGUG00000004447 I 0.859
estExt_Genewise1.C_210127 Daphnia pulex estExt_Genewise1.C_210127 I 0.803
amel4_ncbi_hmm2170 Apis mellifera amel4_ncbi_hmm2170 I 0.761
e_gw.589.3.1 Branchiostoma floridae e_gw.589.3.1 I 0.761
estExt_fgenesh2_pg.C_4600002 Branchiostoma floridae estExt_fgenesh2_pg.C_4600002 I 0.761
nasonia_NCBI_hmm460663 Nasonia vitripennis nasonia_NCBI_hmm460663 I 0.746
e_gw1.53.304.1 Lottia gigantea e_gw1.53.304.1 I 0.732
XP_792124.1 Strongylocentrotus purpuratus XP_792124.1 I 0.732
DGIL_AUG5s13034g4t1 Acyrtosiphon pisum DGIL_AUG5s13034g4t1 I 0.732
DGIL_AUG5s25g7t1 Acyrtosiphon pisum DGIL_AUG5s25g7t1 I 0.732
XP_001194199.1 Strongylocentrotus purpuratus XP_001194199.1 I 0.732
e_gw.27.177.1 Nematostella vectensis e_gw.27.177.1 N 0.718
PHUM390470 Pediculus humanus PHUM390470 N 0.718
ENSCSAVG00000005685 Ciona savignyi ENSCSAVG00000005685 I 0.718
Smp_002550 Schistosoma mansoni Smp_002550 I 0.718
gw.617.10.1 Nematostella vectensis gw.617.10.1 N 0.718
AAEL006748 Aedes aegypti AAEL006748 N 0.718
Sjc_0039250 Schistosoma japonicum Sjc_0039250 I 0.718
gw.10.199.1 Nematostella vectensis gw.10.199.1 N 0.718
gww1.22.130.1 Laccaria bicolor gww1.22.130.1 I 0.704
fgenesh1_pm.C_scaffold_6000172 Pleurotus ostreatus fgenesh1_pm.C_scaffold_6000172 I 0.704
estExt_fgenesh2_kg.C_130331 Serpula lacrymans estExt_fgenesh2_kg.C_130331 I 0.704
CpipJ_CPIJ007339 Culex pipiens CpipJ_CPIJ007339 I 0.704
AGAP006365 Anopheles gambiae AGAP006365 I 0.704
CBN21335 Caenorhabditis brenneri CBN21335 N 0.704
CPIJ007339 Culex quinquefasciatus CPIJ007339 I 0.704