XP_789333.2 (Strongylocentrotus purpuratus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 XP_789333.2 T59253_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM24
M175_0.6 		Homo sapiens WGWGUGD RNAcompete
Ray et al.(2013)
RNCMPT00184 		0.754
ENSTNIG00000009181
M240_0.6 		Tetraodon nigroviridis WGUGUG RNAcompete
Ray et al.(2013)
RNCMPT00285 		0.739
ENSDARG00000058818
M238_0.6 		Danio rerio KWGUGUG RNAcompete
Ray et al.(2013)
RNCMPT00283 		0.739
Rbm38
M049_0.6 		Mus musculus KKGUGUK RNAcompete
Ray et al.(2013)
RNCMPT00051 		0.739
sup-12
M170_0.6 		Caenorhabditis elegans WGUGUGD RNAcompete
Ray et al.(2013)
RNCMPT00179 		0.710
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
XP_789333.2 RRM 12 80

Links

Other RRM family RBPs
Other Strongylocentrotus purpuratus RBPs

80 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_001178734.1 Strongylocentrotus purpuratus XP_001178734.1 I 1.000
gw1.63.188.1 Daphnia pulex gw1.63.188.1 I 0.797
CPIJ008248 Culex quinquefasciatus CPIJ008248 I 0.768
CpipJ_CPIJ008248 Culex pipiens CpipJ_CPIJ008248 I 0.768
AAEL003407 Aedes aegypti AAEL003407 I 0.768
Rbm24 Mus musculus ENSMUSG00000038132 I 0.754
RBM38 Monodelphis domestica ENSMODG00000016458 I 0.754
RBM38 Ornithorhynchus anatinus ENSOANG00000009259 I 0.754
RBM24 Ornithorhynchus anatinus ENSOANG00000011865 I 0.754
RBM24 Procavia capensis ENSPCAG00000015152 I 0.754
RBM24 Monodelphis domestica ENSMODG00000010899 I 0.754
RBM24 Myotis lucifugus ENSMLUG00000016451 I 0.754
RBM38 Homo sapiens ENSG00000132819 I 0.754
RBM24 Gallus gallus ENSGALG00000012712 I 0.754
RBM24 Gorilla gorilla ENSGGOG00000013628 I 0.754
RBM24 Loxodonta africana ENSLAFG00000000116 I 0.754
ENSPPYG00000016256 Pongo pygmaeus ENSPPYG00000016256 I 0.754
gw1.9.44.1 Lottia gigantea gw1.9.44.1 I 0.754
estExt_Genewise1.C_490050 Capitella teleta estExt_Genewise1.C_490050 I 0.754
RBM24 Tursiops truncatus ENSTTRG00000000393 I 0.754
rbm38 Xenopus tropicalis ENSXETG00000011268 I 0.754
rbm24 Xenopus tropicalis ENSXETG00000024618 I 0.754
RBM24 Taeniopygia guttata ENSTGUG00000005984 I 0.754
RBM24 Sus scrofa ENSSSCG00000001066 I 0.754
RBM24 Pan troglodytes ENSPTRG00000017749 I 0.754
RBM24 Homo sapiens ENSG00000112183 D 0.754
RBM24 Pteropus vampyrus ENSPVAG00000004954 I 0.754
Rbm24 Rattus norvegicus ENSRNOG00000016925 I 0.754
72885 Helobdella robusta 72885 N 0.754
RBM38 Macaca mulatta ENSMMUG00000031391 I 0.754
LOC100404144 Callithrix jacchus ENSCJAG00000019139 I 0.754
RBM24 Cavia porcellus ENSCPOG00000008838 I 0.754
Q9I8B3 Xenopus laevis Q9I8B3 I 0.754
RBM24 Callithrix jacchus ENSCJAG00000006579 I 0.754
RBM24 Anolis carolinensis ENSACAG00000003962 I 0.754
nasonia_NCBI_hmm626184 Nasonia vitripennis nasonia_NCBI_hmm626184 I 0.754
amel4_ncbi_hmm7752 Apis mellifera amel4_ncbi_hmm7752 I 0.754
Q6GQD3 Xenopus laevis Q6GQD3 I 0.754
RBM38 Cavia porcellus ENSCPOG00000012781 I 0.754
rbm24b Danio rerio ENSDARG00000031809 I 0.754
CAB96420 Xenopus laevis CAB96420 I 0.754
AAH72812 Xenopus laevis AAH72812 I 0.754
AAH44956 Xenopus laevis AAH44956 I 0.754
ENSDARG00000075681 Danio rerio ENSDARG00000075681 I 0.754
AAH72792 Xenopus laevis AAH72792 I 0.739
RBM38 Sus scrofa ENSSSCG00000007504 I 0.739
BGIBMGA002685 Bombyx mori BGIBMGA002685 I 0.739
ENSTNIG00000009181 Tetraodon nigroviridis ENSTNIG00000009181 D 0.739
RBM24 Takifugu rubripes ENSTRUG00000014826 I 0.739
Q7T3I7 Xenopus laevis Q7T3I7 I 0.739
RBM38 Erinaceus europaeus ENSEEUG00000013489 I 0.739
AAP42281 Xenopus laevis AAP42281 I 0.739
RBM24 Takifugu rubripes ENSTRUG00000010089 I 0.739
RBM24 Tetraodon nigroviridis ENSTNIG00000018417 I 0.739
D3ZGE9_RAT Rattus norvegicus ENSRNOG00000006420 I 0.739
ENSDARG00000058818 Danio rerio ENSDARG00000058818 D 0.739
RBM24 Oryzias latipes ENSORLG00000007916 I 0.739
rbm24a Danio rerio ENSDARG00000078293 I 0.739
RBM24 Gasterosteus aculeatus ENSGACG00000008472 I 0.739
RBM24 Gasterosteus aculeatus ENSGACG00000005383 I 0.739
RBM24 Oryzias latipes ENSORLG00000012546 I 0.739
Rbm38 Mus musculus ENSMUSG00000027510 D 0.739
RBM38 Bos taurus ENSBTAG00000008105 I 0.739
RBM24 Microcebus murinus ENSMICG00000011880 I 0.725
e_gw.482.10.1 Branchiostoma floridae e_gw.482.10.1 I 0.725
e_gw.63.59.1 Branchiostoma floridae e_gw.63.59.1 I 0.725
RBM38 Pan troglodytes ENSPTRG00000013661 I 0.725
AAF81070 Xenopus laevis AAF81070 I 0.725
ENSCSAVG00000001132 Ciona savignyi ENSCSAVG00000001132 I 0.725
RBM38 Oryzias latipes ENSORLG00000012154 I 0.725
RBM38 Takifugu rubripes ENSTRUG00000004291 I 0.725
RBM38 Takifugu rubripes ENSTRUG00000010969 I 0.725
RBM38 Tetraodon nigroviridis ENSTNIG00000007093 I 0.725
RBM38 Gasterosteus aculeatus ENSGACG00000015224 I 0.725
SNAPOd2T00023369001 Oikopleura dioica SNAPOd2T00023369001 I 0.714
WUBG_00807 Wuchereria bancrofti WUBG_00807 I 0.710
sup-12 Caenorhabditis elegans T22B2.4 D 0.710
CJA06291 Caenorhabditis japonica CJA06291 I 0.710
LOAG_12553 Loa loa LOAG_12553 I 0.710
RBM38 Tupaia belangeri ENSTBEG00000001689 I 0.710