e_gw1.2.367.1 (Ostreococcus RCC809)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 e_gw1.2.367.1 T61027_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
eIF-2alpha
M231_0.6 		Drosophila melanogaster WGCAUG RNAcompete
Ray et al.(2013)
RNCMPT00273 		0.711
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.2.367.1 S1 29 98

Links

Other S1 family RBPs
Other Ostreococcus RCC809 RBPs

177 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pg.C_Chr_02.00010078 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_02.00010078 I 0.840
e_gwEuk.2.353.1 Ostreococcus lucimarinus e_gwEuk.2.353.1 I 0.827
estExt_fgenesh1_kg.C_70012 Micromonas pusilla estExt_fgenesh1_kg.C_70012 I 0.827
IGS.gm_12_00191 Chlorella NC64A IGS.gm_12_00191 I 0.773
cassava16515.m1 Manihot esculenta cassava16515.m1 I 0.773
MDP0000155133 Malus x domestica MDP0000155133 I 0.773
estExt_fgenesh1_pg.C_210283 Phytophthora capsici estExt_fgenesh1_pg.C_210283 I 0.771
LjSGA_031492.1 Lotus japonicus LjSGA_031492.1 I 0.763
Medtr3g094730 Medicago truncatula Medtr3g094730 I 0.763
Glyma18g02820.1 Glycine max Glyma18g02820.1 I 0.763
Glyma11g35600.1 Glycine max Glyma11g35600.1 I 0.763
Cucsa.239320 Cucumis sativus Cucsa.239320 I 0.763
Medtr3g094740 Medicago truncatula Medtr3g094740 I 0.763
29607.m000238 Ricinus communis 29607.m000238 I 0.763
estExt_Genewise1.C_100332 Chlorella vulgaris estExt_Genewise1.C_100332 I 0.763
B9HSK1_POPTR Populus trichocarpa POPTR_0010s19230 I 0.763
estExt_Genewise1.C_110295 Coccomyxa C 169 estExt_Genewise1.C_110295 I 0.763
ppa008120m Prunus persica ppa008120m I 0.763
MDP0000663428 Malus x domestica MDP0000663428 I 0.763
fgenesh1_pg.scaffold_55000187 Physcomitrella patens fgenesh1_pg.scaffold_55000187 I 0.763
B9HHU6_POPTR Populus trichocarpa POPTR_0008s07250 I 0.763
PK10564.1 Cannabis sativa PK10564.1 I 0.763
AT2G40290 Arabidopsis thaliana AT2G40290-TAIR-G I 0.763
XM_002881666.1 Arabidopsis lyrata fgenesh2_kg.4__2141__AT2G40290.1 I 0.763
e_gwW.11.341.1 Chlamydomonas reinhardtii e_gwW.11.341.1 I 0.763
estExt_fgenesh1_pm.C_210071 Selaginella moellendorfii estExt_fgenesh1_pm.C_210071 I 0.760
PGTG_13830 Puccinia graminis PGTG_13830 N 0.757
estExt_fgenesh4_pg.C_220183 Volvox carteri estExt_fgenesh4_pg.C_220183 I 0.750
cassava7659.valid.m1 Manihot esculenta cassava7659.valid.m1 I 0.750
cassava7658.valid.m1 Manihot esculenta cassava7658.valid.m1 I 0.750
GSVIVG00024676001 Vitis vinifera GSVIVG00024676001 I 0.750
estExt_gwp_gw1.C_3520018 Physcomitrella patens estExt_gwp_gw1.C_3520018 I 0.750
CC1G_08524 Coprinopsis cinerea CC1G_08524 I 0.737
e_gwh1.12.106.1 Laccaria bicolor e_gwh1.12.106.1 I 0.737
estExt_Genewise1.C_30452 Schizophyllum commune estExt_Genewise1.C_30452 I 0.737
Medtr3g094720 Medicago truncatula Medtr3g094720 I 0.737
mgf006782m Mimulus guttatus mgf006782m I 0.737
TERG_00559 Trichophyton rubrum TERG_00559 I 0.733
HCAG_01136 Histoplasma capsulatum HCAG_01136 I 0.733
fgenesh1_pm.C_scaffold_69000005 Phytophthora ramorum fgenesh1_pm.C_scaffold_69000005 I 0.733
ARB_05709 Arthroderma benhamiae ARB_05709 I 0.733
PITG_07885 Phytophthora infestans PITG_07885 I 0.733
MCYG_00123 Microsporum canis MCYG_00123 I 0.733
TESG_05324 Trichophyton tonsurans TESG_05324 I 0.733
TRV_03711 Trichophyton verrucosum TRV_03711 I 0.733
MGYG_00686 Microsporum gypseum MGYG_00686 I 0.733
TEQG_01370 Trichophyton equinum TEQG_01370 I 0.733
VDBG_01622 Verticillium albo atrum VDBG_01622 I 0.724
GLRG_02833 Colletotrichum graminicola GLRG_02833 I 0.724
BDBG_06604 Blastomyces dermatitidis BDBG_06604 I 0.724
CPSG_04829 Coccidioides posadasii CPSG_04829 I 0.724
FVEG_06185 Fusarium verticillioides FVEG_06185 I 0.724
CIMG_00109 Coccidioides immitis CIMG_00109 I 0.724
UREG_00217 Uncinocarpus reesii UREG_00217 I 0.724
FOXG_08491 Fusarium oxysporum FOXG_08491 I 0.724
VDAG_01930 Verticillium dahliae VDAG_01930 I 0.724
BC1G_14334 Botrytis cinerea BC1G_14334 I 0.724
estExt_Genewise1Plus.C_sca_18_chr2_1_00859 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_00859 I 0.724
estExt_Genewise1.C_10111 Trichoderma reesei estExt_Genewise1.C_10111 I 0.724
EDP42051.1 Malassezia globosa EDP42051.1 I 0.724
PredSwiss_EST393.1 Pneumocystis carinii PredSwiss_EST393.1 I 0.724
e_gww2.12.213.1 Phanerochaete chrysosporium e_gww2.12.213.1 I 0.724
estExt_fgenesh1_pm.C_chr_100036 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_100036 I 0.724
estExt_Genewise1.C_100430 Trichoderma atroviride estExt_Genewise1.C_100430 I 0.724
estExt_Genewise1.C_21511 Trichoderma virens estExt_Genewise1.C_21511 I 0.724
estExt_fgenesh1_pg.C_20141 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_20141 I 0.724
estExt_Genewise1.C_100122 Postia placenta estExt_Genewise1.C_100122 I 0.724
genemark.2222_g Pleurotus ostreatus genemark.2222_g I 0.724
estExt_Genewise1Plus.C_80350 Agaricus bisporus estExt_Genewise1Plus.C_80350 I 0.724
estExt_fgenesh1_kg.C_130002 Sporobolomyces roseus estExt_fgenesh1_kg.C_130002 I 0.720
EIF2 Arabidopsis thaliana AT5G05470-TAIR-G I 0.720
estExt_Genewise1Plus.C_230113 Phycomyces blakesleeanus estExt_Genewise1Plus.C_230113 I 0.720
fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263 Emiliania huxleyi fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263 I 0.720
XM_002873169.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6000426 N 0.720
e_gw1.7.228.1 Trichoplax adhaerens e_gw1.7.228.1 I 0.720
SPPG_00622 Spizellomyces punctatus SPPG_00622 I 0.720
69770 Aureococcus anophagefferens 69770 I 0.720
72304 Aureococcus anophagefferens 72304 I 0.720
estExt_fgenesh1_pg.C_210136 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_210136 I 0.711
estExt_fgenesh1_kg.C_10157 Myceliophthora thermophila estExt_fgenesh1_kg.C_10157 I 0.711
amel4_ncbi_hmm23817 Apis mellifera amel4_ncbi_hmm23817 I 0.711
NCU08277 Neurospora crassa NCU08277 I 0.711
nasonia_NCBI_hmm338664 Nasonia vitripennis nasonia_NCBI_hmm338664 I 0.711
ATEG_04051 Aspergillus terreus CADATEAG00009463 I 0.711
GL20268 Drosophila persimilis FBgn0157863 I 0.711
GM13399 Drosophila sechellia FBgn0168330 I 0.711
GI21763 Drosophila mojavensis FBgn0144493 I 0.711
GG19321 Drosophila erecta FBgn0111525 I 0.711
GA22144-RA Drosophila pseudoobscura FBgn0082124 I 0.711
GF19374 Drosophila ananassae FBgn0096384 I 0.711
GD15749 Drosophila simulans FBgn0187410 I 0.711
GJ19141 Drosophila virilis FBgn0206286 I 0.711
ANIA_03156 Aspergillus nidulans CADANIAG00009914 I 0.711
AFLA_020350 Aspergillus flavus CADAFLAG00003920 I 0.711
NFIA_063860 Neosartorya fischeri CADNFIAG00005762 I 0.711
eIF-2alpha Drosophila melanogaster FBgn0261609 D 0.711
GK25248 Drosophila willistoni FBgn0227207 I 0.711
GE15968 Drosophila yakuba FBgn0233524 I 0.711
ACLA_041660 Aspergillus clavatus CADACLAG00004024 I 0.711
e_gw.114.57.1 Nematostella vectensis e_gw.114.57.1 I 0.711
estExt_fgenesh2_kg.C_40048 Neurospora tetrasperma estExt_fgenesh2_kg.C_40048 I 0.711
estExt_fgenesh2_kg.C_21286 Serpula lacrymans estExt_fgenesh2_kg.C_21286 I 0.711
e_gw1.3.2112.1 Cryphonectria parasitica e_gw1.3.2112.1 I 0.711
AB05699.1 Alternaria brassicicola AB05699.1 I 0.711
CHGG_04762 Chaetomium globosum CHGG_04762 I 0.711
estExt_fgenesh2_pm.C_120283 Heterobasidion annosum estExt_fgenesh2_pm.C_120283 I 0.711
PMAA_021520 Penicillium marneffei PMAA_021520 I 0.711
Kwal_15422 Kluyveromyces waltii Kwal_15422 I 0.711
GSTUMT00002346001 Tuber melanosporum GSTUMT00002346001 I 0.711
fgenesh1_pm.00077_#_3 Aspergillus carbonarius fgenesh1_pm.00077_#_3 I 0.711
Pa_6_5980 Podospora anserina Pa_6_5980 I 0.711
FGSG_06220 Fusarium graminearum FGSG_06220 I 0.711
BGIBMGA004302 Bombyx mori BGIBMGA004302 I 0.711
SNOG_13280 Stagonospora nodorum SNOG_13280 I 0.711
EAT79164.1 Phaeosphaeria nodorum EAT79164.1 I 0.711
estExt_fgenesh3_kg.C_30291 Neurospora discreta estExt_fgenesh3_kg.C_30291 I 0.711
KLTH0B02002g Kluyveromyces thermotolerans KLTH0B02002g I 0.711
UM01463 Ustilago maydis UM01463 I 0.711
PTRG_05239 Pyrenophora tritici repentis PTRG_05239 I 0.711
estExt_Genewise1Plus.C_10999 Thielavia terrestris estExt_Genewise1Plus.C_10999 I 0.711
fgenesh1_pm.C_scaffold_10000060 Batrachochytrium dendrobatidis fgenesh1_pm.C_scaffold_10000060 I 0.711
estExt_GenewiseH_1.C_750056 Nematostella vectensis estExt_GenewiseH_1.C_750056 I 0.711
PASA_GEN_0500123 Daphnia pulex PASA_GEN_0500123 I 0.711
EIF2S1 Sus scrofa ENSSSCG00000002289 I 0.707
EIF2S1 Sorex araneus ENSSARG00000011682 I 0.707
Eif2s1 Rattus norvegicus ENSRNOG00000009432 I 0.707
EIF2S1 Procavia capensis ENSPCAG00000002613 I 0.707
EIF2S1 Spermophilus tridecemlineatus ENSSTOG00000001565 I 0.707
ENSPPYG00000005921 Pongo pygmaeus ENSPPYG00000005921 I 0.707
EIF2S1 Pan troglodytes ENSPTRG00000006462 I 0.707
EIF2S1 Oryzias latipes ENSORLG00000011844 I 0.707
114622 Helobdella robusta 114622 I 0.707
tif211 Schizosaccharomyces pombe SPAC3G9.09c I 0.707
EIF2S1 Tursiops truncatus ENSTTRG00000015806 I 0.707
EIF2S1 Takifugu rubripes ENSTRUG00000017958 I 0.707
EIF2S1 Tetraodon nigroviridis ENSTNIG00000012223 I 0.707
EIF2S1 Taeniopygia guttata ENSTGUG00000011542 I 0.707
SJAG_03629 Schizosaccharomyces japonicus SJAG_03629 I 0.707
BRADI1G16700 Brachypodium distachyon BRADI1G16700 I 0.707
WUBG_12485 Wuchereria bancrofti WUBG_12485 I 0.707
SPOG_03916 Schizosaccharomyces cryophilus SPOG_03916 I 0.707
BRADI1G65210 Brachypodium distachyon BRADI1G65210 N 0.707
EIF2S1 Anolis carolinensis ENSACAG00000005994 I 0.707
LOC100399114 Callithrix jacchus ENSCJAG00000015368 I 0.707
EIF2S1 Canis familiaris ENSCAFG00000016386 I 0.707
IF2A_BOVIN Bos taurus ENSBTAG00000016311 I 0.707
SOCG_01617 Schizosaccharomyces octosporus SOCG_01617 I 0.707
PTSG_05806 Salpingoeca rosetta PTSG_05806 I 0.707
Ame_R013633 Ailuropoda melanoleuca Ame_R013633 I 0.707
fgenesh1_pg.C_scaffold_2000543 Melampsora laricis populina fgenesh1_pg.C_scaffold_2000543 I 0.707
estExt_fgenesh2_pm.C_sca_10068 Lottia gigantea estExt_fgenesh2_pm.C_sca_10068 I 0.707
KLLA0A11814g Kluyveromyces lactis KLLA0A11814g I 0.707
XP_002156465.1 Hydra magnipapillata XP_002156465.1 I 0.707
LOAG_09556 Loa loa LOAG_09556 I 0.707
Bm1_04900 Brugia malayi Bm1_04900 I 0.707
AMSG_04936 Thecamonas trahens AMSG_04936 I 0.707
EIF2S1 Ochotona princeps ENSOPRG00000004520 I 0.707
EIF2S1 Cavia porcellus ENSCPOG00000003313 I 0.707
EIF2S1 Microcebus murinus ENSMICG00000010793 I 0.707
EIF2S1 Meleagris gallopavo ENSMGAG00000011974 I 0.707
EIF2S1 Loxodonta africana ENSLAFG00000013423 I 0.707
EIF2S1 Macaca mulatta ENSMMUG00000021419 I 0.707
EIF2S1 Monodelphis domestica ENSMODG00000009911 I 0.707
IF2A_RABIT Oryctolagus cuniculus ENSOCUG00000012023 I 0.707
EIF2S1 Ornithorhynchus anatinus ENSOANG00000005409 I 0.707
Eif2s1 Mus musculus ENSMUSG00000021116 I 0.707
eif2s1l Danio rerio ENSDARG00000005827 I 0.707
EIF2S1 Gorilla gorilla ENSGGOG00000001603 I 0.707
LOC100052709 Equus caballus ENSECAG00000018424 I 0.707
Eif2s1 Dipodomys ordii ENSDORG00000002382 I 0.707
eif2s1 Danio rerio ENSDARG00000052178 I 0.707
EIF2S1 Erinaceus europaeus ENSEEUG00000010225 I 0.707
EIF2S1 Echinops telfairi ENSETEG00000019003 I 0.707
EIF2S1 Gasterosteus aculeatus ENSGACG00000008569 I 0.707
EIF2S1 Homo sapiens ENSG00000134001 I 0.707
IF2A_CHICK Gallus gallus ENSGALG00000009565 I 0.707
CAOG_02542 Capsaspora owczarzaki CAOG_02542 I 0.701