ENSCAFG00000013766 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSCAFG00000013766 T077628_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NONO
M00507_2.00 		Homo sapiens Sequence logo not available GAGAGGAAC SELEX
Cook et al.(2011)
0.845
NONO
M00505_2.00 		Homo sapiens AGGGA SELEX
Cook et al.(2011)
0.845
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000020292 RRM 70 147
ENSCAFP00000020292 RRM 144 209

RNA contacting residues

no predictions available

Links

Other RRM family RBPs
Other Canis familiaris RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSDNOG00000003267 Dasypus novemcinctus ENSDNOG00000003267 I 0.857
NONO Homo sapiens ENSG00000147140 D 0.855
NONO Anolis carolinensis ENSACAG00000015026 I 0.849
ENSCAFG00000017071 Canis familiaris ENSCAFG00000017071 I 0.845
ENSCJAG00000036744 Callithrix jacchus ENSCJAG00000036744 I 0.845
ENSCPOG00000010263 Cavia porcellus ENSCPOG00000010263 I 0.845
NONO Equus caballus ENSECAG00000008502 I 0.845
NONO Erinaceus europaeus ENSEEUG00000014404 I 0.845
NONO Felis catus ENSFCAG00000014807 I 0.845
NONO Gorilla gorilla ENSGGOG00000006194 I 0.845
NONO Loxodonta africana ENSLAFG00000013422 I 0.845
NONO Microcebus murinus ENSMICG00000000232 I 0.845
NONO Myotis lucifugus ENSMLUG00000002489 I 0.845
NONO Macaca mulatta ENSMMUG00000020481 I 0.845
ENSMPUG00000004937 Mustela putorius furo ENSMPUG00000004937 I 0.845
Nono Mus musculus ENSMUSG00000031311 I 0.845
ENSNLEG00000001278 Nomascus leucogenys ENSNLEG00000001278 I 0.845
ENSOCUG00000021848 Oryctolagus cuniculus ENSOCUG00000021848 I 0.845
NONO Otolemur garnettii ENSOGAG00000004834 I 0.845
ENSPANG00000013979 Papio anubis ENSPANG00000013979 I 0.845
NONO Procavia capensis ENSPCAG00000002541 I 0.845
ENSPPYG00000020451 Pongo abelii ENSPPYG00000020451 I 0.845
NONO Pan troglodytes ENSPTRG00000022010 I 0.845
NONO Pteropus vampyrus ENSPVAG00000016503 I 0.845
Nono Rattus norvegicus ENSRNOG00000003689 I 0.845
NONO Sus scrofa ENSSSCG00000023245 I 0.845
ENSSTOG00000015869 Ictidomys tridecemlineatus ENSSTOG00000015869 I 0.845
NONO Tursiops truncatus ENSTTRG00000009605 I 0.845
NONO Vicugna pacos ENSVPAG00000002272 I 0.845
ENSBTAP00000016122-D1 Bos grunniens ENSBTAP00000016122-D1 I 0.845
ENSP00000276079 Macaca fascicularis ENSP00000276079 I 0.845
Myotis_brandtii_NONO_10007307 Myotis brandtii Myotis_brandtii_NONO_10007307 I 0.845
Ogr12033 Ophisaurus gracilis Ogr12033 I 0.845
Pvit_05344 Pogona vitticeps Pvit_05344 I 0.845
ENSAMEG00000016057 Ailuropoda melanoleuca ENSAMEG00000016057 I 0.845
NONO Bos taurus ENSBTAG00000012152 I 0.845
ENSCAFG00000003207 Canis familiaris ENSCAFG00000003207 I 0.845
ENSCJAG00000003136 Callithrix jacchus ENSCJAG00000003136 I 0.841
ENSMEUG00000004294 Macropus eugenii ENSMEUG00000004294 I 0.838
NONO Monodelphis domestica ENSMODG00000004445 I 0.838
ENSOARG00000016966 Ovis aries ENSOARG00000016966 I 0.838
ENSPSIG00000010678 Pelodiscus sinensis ENSPSIG00000010678 I 0.838
NONO Sorex araneus ENSSARG00000007959 I 0.838
ENSSHAG00000010195 Sarcophilus harrisii ENSSHAG00000010195 I 0.838
Alligator_sinensis_CCG000628.3 Alligator sinensis Alligator_sinensis_CCG000628.3 I 0.838
Cmyd_10013139 Chelonia mydas Cmyd_10013139 I 0.838
ENSFALG00000011765 Ficedula albicollis ENSFALG00000011765 I 0.831
NONO Gallus gallus ENSGALG00000005507 I 0.831
NONO Meleagris gallopavo ENSMGAG00000008869 I 0.831
NONO Taeniopygia guttata ENSTGUG00000007048 I 0.831
Afo_R007329 Aptenodytes forsteri Afo_R007329 I 0.831
Brh_R000687 Buceros rhinoceros Brh_R000687 I 0.831
Tal_R004102 Tyto alba Tal_R004102 I 0.831
ENSAPLG00000002642 Anas platyrhynchos ENSAPLG00000002642 I 0.831
ENSCPOG00000023605 Cavia porcellus ENSCPOG00000023605 I 0.824
Gfo_R003471 Geospiza fortis Gfo_R003471 I 0.816
Aan_R015248 Calypte anna Aan_R015248 I 0.811
ENSLACG00000000598 Latimeria chalumnae ENSLACG00000000598 I 0.766
nono.L Xenopus laevis XB-GENE-1002501 I 0.753
nono Xenopus tropicalis XB-GENE-1002494 I 0.750