nono.L (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 XB-GENE-1002501 T129487_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
nono.L
M28878_2.00		 Xenopus laevis NGURGUKK JPLE
Sasse et al.(2025)
RM_Xen.lae_XB-GENE-1002501 		0.040

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NONO
M00507_2.00 		Homo sapiens Sequence logo not available GAGAGGAAC SELEX
Cook et al.(2011)
0.831
NONO
M00505_2.00 		Homo sapiens AGGGA SELEX
Cook et al.(2011)
0.831
SFPQ
M00809_2.00 		Homo sapiens UAGUG RNA-Bind-n-Seq
Dominguez et al.(2018)
0.728
SFPQ
M00808_2.00 		Homo sapiens WGUAAN RNA-Bind-n-Seq
Dominguez et al.(2018)
0.728
SFPQ
M00506_2.00 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
0.728
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
0.728
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.040
(92.03%)

RNA Binding Domains

Protein ID Domain From To Sequence
AAH45128 RRM 65 142
AAH45128 RRM 139 206
BAE54372 RRM 64 141
BAE54372 RRM 138 205

RNA contacting residues

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

132 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nono Xenopus tropicalis XB-GENE-1002494 I 0.946
ENSAPLG00000002642 Anas platyrhynchos ENSAPLG00000002642 I 0.858
ENSFALG00000011765 Ficedula albicollis ENSFALG00000011765 I 0.858
NONO Gallus gallus ENSGALG00000005507 I 0.858
NONO Meleagris gallopavo ENSMGAG00000008869 I 0.858
NONO Taeniopygia guttata ENSTGUG00000007048 I 0.858
Afo_R007329 Aptenodytes forsteri Afo_R007329 I 0.858
Brh_R000687 Buceros rhinoceros Brh_R000687 I 0.858
Tal_R004102 Tyto alba Tal_R004102 I 0.858
ENSPSIG00000010678 Pelodiscus sinensis ENSPSIG00000010678 I 0.851
Alligator_sinensis_CCG000628.3 Alligator sinensis Alligator_sinensis_CCG000628.3 I 0.851
Cmyd_10013139 Chelonia mydas Cmyd_10013139 I 0.851
Ogr12033 Ophisaurus gracilis Ogr12033 I 0.851
Pvit_05344 Pogona vitticeps Pvit_05344 I 0.851
NONO Anolis carolinensis ENSACAG00000015026 I 0.850
ENSDNOG00000003267 Dasypus novemcinctus ENSDNOG00000003267 I 0.844
ENSMEUG00000004294 Macropus eugenii ENSMEUG00000004294 I 0.838
NONO Monodelphis domestica ENSMODG00000004445 I 0.838
ENSSHAG00000010195 Sarcophilus harrisii ENSSHAG00000010195 I 0.838
ENSAMEG00000016057 Ailuropoda melanoleuca ENSAMEG00000016057 I 0.831
NONO Bos taurus ENSBTAG00000012152 I 0.831
ENSCAFG00000003207 Canis familiaris ENSCAFG00000003207 I 0.831
ENSCAFG00000017071 Canis familiaris ENSCAFG00000017071 I 0.831
ENSCJAG00000036744 Callithrix jacchus ENSCJAG00000036744 I 0.831
ENSCPOG00000010263 Cavia porcellus ENSCPOG00000010263 I 0.831
NONO Equus caballus ENSECAG00000008502 I 0.831
NONO Erinaceus europaeus ENSEEUG00000014404 I 0.831
NONO Felis catus ENSFCAG00000014807 I 0.831
NONO Homo sapiens ENSG00000147140 D 0.831
NONO Gorilla gorilla ENSGGOG00000006194 I 0.831
NONO Loxodonta africana ENSLAFG00000013422 I 0.831
NONO Microcebus murinus ENSMICG00000000232 I 0.831
NONO Myotis lucifugus ENSMLUG00000002489 I 0.831
NONO Macaca mulatta ENSMMUG00000020481 I 0.831
ENSMPUG00000004937 Mustela putorius furo ENSMPUG00000004937 I 0.831
Nono Mus musculus ENSMUSG00000031311 I 0.831
ENSNLEG00000001278 Nomascus leucogenys ENSNLEG00000001278 I 0.831
ENSOCUG00000021848 Oryctolagus cuniculus ENSOCUG00000021848 I 0.831
NONO Otolemur garnettii ENSOGAG00000004834 I 0.831
ENSPANG00000013979 Papio anubis ENSPANG00000013979 I 0.831
NONO Procavia capensis ENSPCAG00000002541 I 0.831
ENSPPYG00000020451 Pongo abelii ENSPPYG00000020451 I 0.831
NONO Pan troglodytes ENSPTRG00000022010 I 0.831
NONO Pteropus vampyrus ENSPVAG00000016503 I 0.831
Nono Rattus norvegicus ENSRNOG00000003689 I 0.831
NONO Sus scrofa ENSSSCG00000023245 I 0.831
ENSSTOG00000015869 Ictidomys tridecemlineatus ENSSTOG00000015869 I 0.831
NONO Tursiops truncatus ENSTTRG00000009605 I 0.831
NONO Vicugna pacos ENSVPAG00000002272 I 0.831
Aan_R015248 Calypte anna Aan_R015248 I 0.831
ENSBTAP00000016122-D1 Bos grunniens ENSBTAP00000016122-D1 I 0.831
ENSP00000276079 Macaca fascicularis ENSP00000276079 I 0.831
Myotis_brandtii_NONO_10007307 Myotis brandtii Myotis_brandtii_NONO_10007307 I 0.831
Gfo_R003471 Geospiza fortis Gfo_R003471 I 0.830
ENSOARG00000016966 Ovis aries ENSOARG00000016966 I 0.824
NONO Sorex araneus ENSSARG00000007959 I 0.824
ENSLACG00000000598 Latimeria chalumnae ENSLACG00000000598 I 0.815
ENSCPOG00000023605 Cavia porcellus ENSCPOG00000023605 I 0.811
ENSCJAG00000003136 Callithrix jacchus ENSCJAG00000003136 I 0.810
ENSLOCG00000014739 Lepisosteus oculatus ENSLOCG00000014739 I 0.788
sfpq Xenopus tropicalis XB-GENE-5968416 I 0.776
nono Danio rerio ENSDARG00000020482 I 0.774
ENSLOCG00000001067 Lepisosteus oculatus ENSLOCG00000001067 I 0.769
ENSAMXG00000006846 Astyanax mexicanus ENSAMXG00000006846 I 0.762
sfpq Takifugu rubripes ENSTRUG00000003783 I 0.762
ENSCAFG00000013766 Canis familiaris ENSCAFG00000013766 I 0.753
ENSLACG00000014728 Latimeria chalumnae ENSLACG00000014728 I 0.752
ENSAMXG00000011538 Astyanax mexicanus ENSAMXG00000011538 I 0.741
nono Gasterosteus aculeatus ENSGACG00000011824 I 0.736
pspc1 Xenopus tropicalis XB-GENE-492866 I 0.735
ENSMLUG00000027090 Myotis lucifugus ENSMLUG00000027090 I 0.735
ENSXMAG00000019883 Xiphophorus maculatus ENSXMAG00000019883 I 0.735
Cmyd_10015354 Chelonia mydas Cmyd_10015354 I 0.735
Myotis_brandtii_SFPQ_10028873 Myotis brandtii Myotis_brandtii_SFPQ_10028873 I 0.735
Pvit_19348 Pogona vitticeps Pvit_19348 I 0.735
SFPQ Gallus gallus ENSGALG00000002514 I 0.733
ENSONIG00000020497 Oreochromis niloticus ENSONIG00000020497 I 0.730
sfpq Tetraodon nigroviridis ENSTNIG00000011331 I 0.730
nono Oryzias latipes ENSORLG00000012801 I 0.730
ENSAMEG00000000815 Ailuropoda melanoleuca ENSAMEG00000000815 I 0.728
ENSAPLG00000003643 Anas platyrhynchos ENSAPLG00000003643 I 0.728
SFPQ Bos taurus ENSBTAG00000016328 I 0.728
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.728
ENSCJAG00000001431 Callithrix jacchus ENSCJAG00000001431 I 0.728
ENSCPOG00000015018 Cavia porcellus ENSCPOG00000015018 I 0.728
ENSCSAG00000001082 Chlorocebus sabaeus ENSCSAG00000001082 I 0.728
SFPQ Dasypus novemcinctus ENSDNOG00000049454 I 0.728
ENSECAG00000000642 Equus caballus ENSECAG00000000642 I 0.728
SFPQ Echinops telfairi ENSETEG00000001095 I 0.728
ENSFCAG00000031287 Felis catus ENSFCAG00000031287 I 0.728
SFPQ Homo sapiens ENSG00000116560 D 0.728
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.728
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.728
ENSMICG00000011755 Microcebus murinus ENSMICG00000011755 I 0.728
Sfpq Mus musculus ENSMUSG00000028820 I 0.728
ENSNLEG00000010868 Nomascus leucogenys ENSNLEG00000010868 I 0.728
ENSOARG00000019439 Ovis aries ENSOARG00000019439 I 0.728
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.728
SFPQ Otolemur garnettii ENSOGAG00000027710 I 0.728
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.728
ENSPANG00000005380 Papio anubis ENSPANG00000005380 I 0.728
SFPQ Procavia capensis ENSPCAG00000006164 I 0.728
ENSPPYG00000001560 Pongo abelii ENSPPYG00000001560 I 0.728
ENSPSIG00000011494 Pelodiscus sinensis ENSPSIG00000011494 I 0.728
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.728
Sfpq Rattus norvegicus ENSRNOG00000058461 I 0.728
ENSSTOG00000014004 Ictidomys tridecemlineatus ENSSTOG00000014004 I 0.728
ENSTGUG00000001722 Taeniopygia guttata ENSTGUG00000001722 I 0.728
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.728
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.728
Aan_R015520 Calypte anna Aan_R015520 I 0.728
Afo_R013931 Aptenodytes forsteri Afo_R013931 I 0.728
Brh_R010044 Buceros rhinoceros Brh_R010044 I 0.728
ENSP00000349748-D1 Bos grunniens ENSP00000349748-D1 I 0.728
Gfo_R008467 Geospiza fortis Gfo_R008467 I 0.728
Tal_R009770 Tyto alba Tal_R009770 I 0.728
ENSCAFG00000018271 Canis familiaris ENSCAFG00000018271 I 0.726
ENSPFOG00000016436 Poecilia formosa ENSPFOG00000016436 I 0.723
nono Takifugu rubripes ENSTRUG00000005554 I 0.723
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.721
SFPQ Monodelphis domestica ENSMODG00000017937 I 0.721
ENSSHAG00000016107 Sarcophilus harrisii ENSSHAG00000016107 I 0.721
Alligator_sinensis_CCG014919.3 Alligator sinensis Alligator_sinensis_CCG014919.3 I 0.721
ENSGMOG00000011950 Gadus morhua ENSGMOG00000011950 I 0.720
SFPQ Anolis carolinensis ENSACAG00000013307 I 0.719
sfpq Gasterosteus aculeatus ENSGACG00000002034 I 0.718
SFPQ Tupaia belangeri ENSTBEG00000006238 I 0.707
ENSPFOG00000003127 Poecilia formosa ENSPFOG00000003127 I 0.703
ENSXMAG00000016391 Xiphophorus maculatus ENSXMAG00000016391 I 0.703
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.701
ENSPMAG00000005583 Petromyzon marinus ENSPMAG00000005583 I 0.701