SJAG_00225 (Schizosaccharomyces japonicus)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		SJAG_00225 T00320_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SJAG_00225T0 CCCH ZF 13 39
SJAG_00225T0 RRM 72 135
SJAG_00225T0 CCCH ZF 143 169

Links

Other CCCH ZF,RRM family RBPs
Other Schizosaccharomyces japonicus RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB00394.1 Alternaria brassicicola AB00394.1 N 0.739
BDBG_04724 Blastomyces dermatitidis BDBG_04724 N 0.704
ACLA_061920 Aspergillus clavatus CADACLAG00005985 N 0.715
AFLA_090330 Aspergillus flavus CADAFLAG00008718 N 0.710
AFUA_3G02380 Aspergillus fumigatus CADAFUAG00000282 N 0.710
An01g01060 Aspergillus niger CADANGAG00000104 N 0.715
ANIA_09362 Aspergillus nidulans CADANIAG00001149 N 0.715
AO090120000034 Aspergillus oryzae CADAORAG00011213 N 0.710
ATEG_07467 Aspergillus terreus CADATEAG00003016 N 0.715
NFIA_003540 Neosartorya fischeri CADNFIAG00000551 N 0.710
CHGG_01857 Chaetomium globosum CHGG_01857 N 0.744
CIMG_04462 Coccidioides immitis CIMG_04462 N 0.715
CPSG_06303 Coccidioides posadasii CPSG_06303 N 0.724
EAT83092.1 Phaeosphaeria nodorum EAT83092.1 N 0.731
estExt_fgenesh3_kg.C_70195 Neurospora discreta estExt_fgenesh3_kg.C_70195 N 0.736
estExt_Genewise1.C_270092 Cochliobolus heterostrophus C5 estExt_Genewise1.C_270092 N 0.739
estExt_Genewise1.C_sca_3_chr4_2_00935 Nectria haematococca estExt_Genewise1.C_sca_3_chr4_2_00935 N 0.737
estExt_Genewise1Plus.C_31771 Mucor circinelloides estExt_Genewise1Plus.C_31771 N 0.737
estExt_Genewise1Plus.C_50321 Neurospora tetrasperma estExt_Genewise1Plus.C_50321 N 0.736
estExt_Genewise1Plus.C_51141 Cryphonectria parasitica estExt_Genewise1Plus.C_51141 N 0.732
fgenesh1_pg.00771_#_421 Aspergillus carbonarius fgenesh1_pg.00771_#_421 N 0.710
fgenesh1_pg.C_scaffold_49000019 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_49000019 N 0.746
FGSG_06860 Fusarium graminearum FGSG_06860 N 0.713
FOXG_01966 Fusarium oxysporum FOXG_01966 N 0.713
FVEG_05126 Fusarium verticillioides FVEG_05126 N 0.713
GLRG_01478 Colletotrichum graminicola GLRG_01478 N 0.713
GSTUMT00005341001 Tuber melanosporum GSTUMT00005341001 N 0.720
MCYG_05692 Microsporum canis MCYG_05692 N 0.707
MGG_09948 Magnaporthe oryzae MGG_09948 N 0.707
MGYG_02786 Microsporum gypseum MGYG_02786 N 0.707
NCU03261 Neurospora crassa NCU03261 N 0.736
Pa_1_2890 Podospora anserina Pa_1_2890 N 0.730
PMAA_016150 Penicillium marneffei PMAA_016150 N 0.763
PredSwiss_ASS2010_1021.1 Pneumocystis carinii PredSwiss_ASS2010_1021.1 N 0.807
PredSwiss_CON3041.3 Pneumocystis carinii PredSwiss_CON3041.3 N 0.807
PTRG_10702 Pyrenophora tritici repentis PTRG_10702 N 0.739
RO3G_03843 Rhizopus oryzae RO3G_03843 N 0.729
SNOG_09827 Stagonospora nodorum SNOG_09827 N 0.731
SOCG_04535 Schizosaccharomyces octosporus SOCG_04535 N 0.916
SPAP8A3.06 Schizosaccharomyces pombe SPAP8A3.06 N 0.949
SPOG_03722 Schizosaccharomyces cryophilus SPOG_03722 N 0.917
TERG_06877 Trichophyton rubrum TERG_06877 N 0.707
TESG_04620 Trichophyton tonsurans TESG_04620 N 0.707