CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AFUA_3G02380
(
Aspergillus fumigatus
)
CCCH ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1)
IPR000571
IPR000504
CADAFUAG00000282
T00411_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAFUAP00000282
CCCH ZF
13
39
QDKVNCSFYYKIGACRHGDRCSRKHVK
CADAFUAP00000282
RRM
65
134
PSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAACDALNSRWYAARPIY
CADAFUAP00000282
CCCH ZF
142
168
DFREACCRLNSGEGCVRGGFCNFIHRK
Links
Other
CCCH ZF,RRM
family RBPs
Other
Aspergillus fumigatus
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NFIA_003540
Neosartorya fischeri
CADNFIAG00000551
N
1.000
fgenesh1_pg.00771_#_421
Aspergillus carbonarius
fgenesh1_pg.00771_#_421
N
1.000
An01g01060
Aspergillus niger
CADANGAG00000104
N
0.992
ANIA_09362
Aspergillus nidulans
CADANIAG00001149
N
0.992
ATEG_07467
Aspergillus terreus
CADATEAG00003016
N
0.992
ACLA_061920
Aspergillus clavatus
CADACLAG00005985
N
0.992
AFLA_090330
Aspergillus flavus
CADAFLAG00008718
N
0.984
AO090120000034
Aspergillus oryzae
CADAORAG00011213
N
0.984
estExt_Genewise1Plus.C_51141
Cryphonectria parasitica
estExt_Genewise1Plus.C_51141
N
0.968
BDBG_04724
Blastomyces dermatitidis
BDBG_04724
N
0.952
CPSG_06303
Coccidioides posadasii
CPSG_06303
N
0.952
CIMG_04462
Coccidioides immitis
CIMG_04462
N
0.952
MCYG_05692
Microsporum canis
MCYG_05692
N
0.935
Pa_1_2890
Podospora anserina
Pa_1_2890
N
0.935
TERG_06877
Trichophyton rubrum
TERG_06877
N
0.935
estExt_Genewise1Plus.C_50321
Neurospora tetrasperma
estExt_Genewise1Plus.C_50321
N
0.935
NCU03261
Neurospora crassa
NCU03261
N
0.935
estExt_fgenesh3_kg.C_70195
Neurospora discreta
estExt_fgenesh3_kg.C_70195
N
0.935
TESG_04620
Trichophyton tonsurans
TESG_04620
N
0.935
MGYG_02786
Microsporum gypseum
MGYG_02786
N
0.935
CHGG_01857
Chaetomium globosum
CHGG_01857
N
0.927
FVEG_05126
Fusarium verticillioides
FVEG_05126
N
0.927
FGSG_06860
Fusarium graminearum
FGSG_06860
N
0.927
FOXG_01966
Fusarium oxysporum
FOXG_01966
N
0.927
MGG_09948
Magnaporthe oryzae
MGG_09948
N
0.927
VDAG_04200
Verticillium dahliae
VDAG_04200
N
0.919
GLRG_01478
Colletotrichum graminicola
GLRG_01478
N
0.919
VDBG_04657
Verticillium albo atrum
VDBG_04657
N
0.919
PMAA_016150
Penicillium marneffei
PMAA_016150
N
0.903
estExt_Genewise1.C_sca_3_chr4_2_00935
Nectria haematococca
estExt_Genewise1.C_sca_3_chr4_2_00935
N
0.895
fgenesh1_pg.C_scaffold_49000019
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_49000019
N
0.895
PTRG_10702
Pyrenophora tritici repentis
PTRG_10702
N
0.887
AB00394.1
Alternaria brassicicola
AB00394.1
N
0.887
estExt_Genewise1.C_270092
Cochliobolus heterostrophus C5
estExt_Genewise1.C_270092
N
0.887
EAT83092.1
Phaeosphaeria nodorum
EAT83092.1
N
0.879
SNOG_09827
Stagonospora nodorum
SNOG_09827
N
0.879
GSTUMT00005341001
Tuber melanosporum
GSTUMT00005341001
N
0.863
BC1G_10530
Botrytis cinerea
BC1G_10530
N
0.847
SS1G_04229
Sclerotinia sclerotiorum
SS1G_04229
N
0.847
estExt_Genewise1.C_chr_10003
Mycosphaerella graminicola
estExt_Genewise1.C_chr_10003
N
0.847
PredSwiss_ASS2010_1021.1
Pneumocystis carinii
PredSwiss_ASS2010_1021.1
N
0.752
PredSwiss_CON3041.3
Pneumocystis carinii
PredSwiss_CON3041.3
N
0.752
SPAP8A3.06
Schizosaccharomyces pombe
SPAP8A3.06
N
0.718
SJAG_00225
Schizosaccharomyces japonicus
SJAG_00225
N
0.710