An01g01060 (Aspergillus niger)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		CADANGAG00000104 T00413_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00000097 CCCH ZF 13 39
CADANGAP00000097 RRM 66 134
CADANGAP00000097 CCCH ZF 142 168

Links

Other CCCH ZF,RRM family RBPs
Other Aspergillus niger RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_061920 Aspergillus clavatus CADACLAG00005985 N 1.000
ATEG_07467 Aspergillus terreus CADATEAG00003016 N 1.000
ANIA_09362 Aspergillus nidulans CADANIAG00001149 N 1.000
AFUA_3G02380 Aspergillus fumigatus CADAFUAG00000282 N 0.992
fgenesh1_pg.00771_#_421 Aspergillus carbonarius fgenesh1_pg.00771_#_421 N 0.992
NFIA_003540 Neosartorya fischeri CADNFIAG00000551 N 0.992
AO090120000034 Aspergillus oryzae CADAORAG00011213 N 0.976
AFLA_090330 Aspergillus flavus CADAFLAG00008718 N 0.976
estExt_Genewise1Plus.C_51141 Cryphonectria parasitica estExt_Genewise1Plus.C_51141 N 0.976
CPSG_06303 Coccidioides posadasii CPSG_06303 N 0.959
CIMG_04462 Coccidioides immitis CIMG_04462 N 0.959
BDBG_04724 Blastomyces dermatitidis BDBG_04724 N 0.944
MGYG_02786 Microsporum gypseum MGYG_02786 N 0.943
Pa_1_2890 Podospora anserina Pa_1_2890 N 0.943
NCU03261 Neurospora crassa NCU03261 N 0.943
estExt_fgenesh3_kg.C_70195 Neurospora discreta estExt_fgenesh3_kg.C_70195 N 0.943
TESG_04620 Trichophyton tonsurans TESG_04620 N 0.943
TERG_06877 Trichophyton rubrum TERG_06877 N 0.943
estExt_Genewise1Plus.C_50321 Neurospora tetrasperma estExt_Genewise1Plus.C_50321 N 0.943
MCYG_05692 Microsporum canis MCYG_05692 N 0.943
FGSG_06860 Fusarium graminearum FGSG_06860 N 0.935
FOXG_01966 Fusarium oxysporum FOXG_01966 N 0.935
MGG_09948 Magnaporthe oryzae MGG_09948 N 0.935
CHGG_01857 Chaetomium globosum CHGG_01857 N 0.935
FVEG_05126 Fusarium verticillioides FVEG_05126 N 0.935
VDAG_04200 Verticillium dahliae VDAG_04200 N 0.927
GLRG_01478 Colletotrichum graminicola GLRG_01478 N 0.927
VDBG_04657 Verticillium albo atrum VDBG_04657 N 0.927
PMAA_016150 Penicillium marneffei PMAA_016150 N 0.911
fgenesh1_pg.C_scaffold_49000019 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_49000019 N 0.902
estExt_Genewise1.C_sca_3_chr4_2_00935 Nectria haematococca estExt_Genewise1.C_sca_3_chr4_2_00935 N 0.902
estExt_Genewise1.C_270092 Cochliobolus heterostrophus C5 estExt_Genewise1.C_270092 N 0.894
PTRG_10702 Pyrenophora tritici repentis PTRG_10702 N 0.894
AB00394.1 Alternaria brassicicola AB00394.1 N 0.894
SNOG_09827 Stagonospora nodorum SNOG_09827 N 0.886
EAT83092.1 Phaeosphaeria nodorum EAT83092.1 N 0.886
GSTUMT00005341001 Tuber melanosporum GSTUMT00005341001 N 0.870
BC1G_10530 Botrytis cinerea BC1G_10530 N 0.854
SS1G_04229 Sclerotinia sclerotiorum SS1G_04229 N 0.854
estExt_Genewise1.C_chr_10003 Mycosphaerella graminicola estExt_Genewise1.C_chr_10003 N 0.854
PredSwiss_ASS2010_1021.1 Pneumocystis carinii PredSwiss_ASS2010_1021.1 N 0.758
PredSwiss_CON3041.3 Pneumocystis carinii PredSwiss_CON3041.3 N 0.758
SPAP8A3.06 Schizosaccharomyces pombe SPAP8A3.06 N 0.724
SJAG_00225 Schizosaccharomyces japonicus SJAG_00225 N 0.715