Glyma18g09020.1 (Glycine max)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		Glyma18g09020.1 T00968_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma18g09020.1 CCCH ZF 152 176
Glyma18g09020.1 RRM 313 373

Links

Other CCCH ZF,RRM family RBPs
Other Glycine max RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
27613.m000645 Ricinus communis 27613.m000645 N 0.000
29223.m000023 Ricinus communis 29223.m000023 N 0.000
AT2G05160 Arabidopsis thaliana AT2G05160-TAIR-G N 0.000
cassava31399.valid.m1 Manihot esculenta cassava31399.valid.m1 N 0.736
cassava31400.valid.m1 Manihot esculenta cassava31400.valid.m1 N 0.736
cassava36931.valid.m1 Manihot esculenta cassava36931.valid.m1 N 0.736
cassava7063.valid.m1 Manihot esculenta cassava7063.valid.m1 N 0.724
XM_002876131.1 Arabidopsis lyrata fgenesh2_kg.5__1664__AT3G52980.1 N 0.000
Glyma14g01930.1 Glycine max Glyma14g01930.1 N 0.736
GRMZM2G044004 Zea mays GRMZM2G044004 N 0.000
GSVIVG00037782001 Vitis vinifera GSVIVG00037782001 N 0.724
MDP0000120462 Malus x domestica MDP0000120462 N 0.000
MDP0000214614 Malus x domestica MDP0000214614 N 0.000
Medtr5g008940 Medicago truncatula Medtr5g008940 N 0.000
Medtr5g102170 Medicago truncatula Medtr5g102170 N 0.000
mgf003557m Mimulus guttatus mgf003557m N 0.000
PK01281.1 Cannabis sativa PK01281.1 N 0.000
PK20504.1 Cannabis sativa PK20504.1 N 0.000
B9GI27_POPTR Populus trichocarpa POPTR_0001s26250 N 0.000
B9GTF9_POPTR Populus trichocarpa POPTR_0002s22240 N 0.000
B9IAR9_POPTR Populus trichocarpa POPTR_0014s16340 N 0.724
ppa002383m Prunus persica ppa002383m N 0.000
ppa003564m Prunus persica ppa003564m N 0.000
ppa019338m Prunus persica ppa019338m N 0.782
SB08G001980 Sorghum bicolor Sb08g001980 N 0.000