CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUP153
(
Pan troglodytes
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSPTRG00000017752
T26737_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000042467
RanBP ZF
657
687
KAGSSWQCDTCLLQNKVTDNKCIACQAAKLS
ENSPTRP00000042467
RanBP ZF
722
751
VIGTWDCDTCLVQNKPEAIKCVACETPKPG
ENSPTRP00000042467
RanBP ZF
793
822
PIGSWECSVCCVSNNAEDNKCVSCMSEKPG
ENSPTRP00000042467
RanBP ZF
851
880
PEGSWDCELCLVQNKADSTKCLACESAKPG
Links
Other
RanBP ZF
family RBPs
Other
Pan troglodytes
RBPs
37 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R015605
Ailuropoda melanoleuca
Ame_R015605
N
0.868
NUP153
Anolis carolinensis
ENSACAG00000004118
N
0.760
NUP153
Bos taurus
ENSBTAG00000017128
N
0.884
NUP153
Canis familiaris
ENSCAFG00000010146
N
0.876
ENSCHOG00000003510
Choloepus hoffmanni
ENSCHOG00000003510
N
0.785
ENSCHOG00000007137
Choloepus hoffmanni
ENSCHOG00000007137
N
0.769
ENSCHOG00000008316
Choloepus hoffmanni
ENSCHOG00000008316
N
0.769
ENSCHOG00000009608
Choloepus hoffmanni
ENSCHOG00000009608
N
0.769
ENSCHOG00000013388
Choloepus hoffmanni
ENSCHOG00000013388
N
0.744
NUP153
Callithrix jacchus
ENSCJAG00000006685
N
0.942
NUP153
Cavia porcellus
ENSCPOG00000004007
N
0.851
Nup153
Dipodomys ordii
ENSDORG00000001736
N
0.917
NUP153
Equus caballus
ENSECAG00000016010
N
0.893
NUP153
Erinaceus europaeus
ENSEEUG00000010183
N
0.876
NUP153
Felis catus
ENSFCAG00000011583
N
0.860
NUP153
Homo sapiens
ENSG00000124789
N
1.000
NUP153
Gallus gallus
ENSGALG00000012720
N
0.711
NUP153
Gorilla gorilla
ENSGGOG00000014261
N
1.000
NUP153
Loxodonta africana
ENSLAFG00000015905
N
0.826
NUP153
Myotis lucifugus
ENSMLUG00000004775
N
0.861
NUP153
Macaca mulatta
ENSMMUG00000001993
N
0.975
NUP153
Monodelphis domestica
ENSMODG00000010951
N
0.811
Nup153
Mus musculus
ENSMUSG00000021374
N
0.901
NUP153
Ornithorhynchus anatinus
ENSOANG00000011858
N
0.818
NUP153
Oryctolagus cuniculus
ENSOCUG00000003064
N
0.835
NUP153
Otolemur garnettii
ENSOGAG00000014899
N
0.942
NUP153
Ochotona princeps
ENSOPRG00000006221
N
0.860
NUP153
Procavia capensis
ENSPCAG00000010444
N
0.826
ENSPPYG00000016259
Pongo pygmaeus
ENSPPYG00000016259
N
0.967
NUP153
Pteropus vampyrus
ENSPVAG00000012632
N
0.901
Nup153
Rattus norvegicus
ENSRNOG00000001456
N
0.909
NUP153
Sorex araneus
ENSSARG00000013269
N
0.818
NUP153
Tupaia belangeri
ENSTBEG00000004161
N
0.826
ENSTSYG00000001251
Tarsius syrichta
ENSTSYG00000001251
N
0.926
ENSTSYG00000001592
Tarsius syrichta
ENSTSYG00000001592
N
0.843
ENSTSYG00000010775
Tarsius syrichta
ENSTSYG00000010775
N
0.884
NUP153
Vicugna pacos
ENSVPAG00000002072
N
0.893