amel4_ncbi_hmm11379 (Apis mellifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 amel4_ncbi_hmm11379 T31838_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm11379 RRM 135 204
amel4_ncbi_hmm11379 RRM 233 303
amel4_ncbi_hmm11379 RRM 405 460

Links

Other RRM family RBPs
Other Apis mellifera RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL005046 Aedes aegypti AAEL005046 N 0.881
AAH75146 Xenopus laevis AAH75146 N 0.745
AAH77813 Xenopus laevis AAH77813 N 0.760
AGAP008433 Anopheles gambiae AGAP008433 N 0.893
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.765
CPIJ014704 Culex quinquefasciatus CPIJ014704 N 0.889
CPIJ019416 Culex quinquefasciatus CPIJ019416 N 0.889
CpipJ_CPIJ014704 Culex pipiens CpipJ_CPIJ014704 N 0.889
CpipJ_CPIJ019416 Culex pipiens CpipJ_CPIJ019416 N 0.889
DGIL_AUG5s7518g10t1 Acyrtosiphon pisum DGIL_AUG5s7518g10t1 N 0.845
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.769
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.765
RBM39 Canis familiaris ENSCAFG00000008327 N 0.765
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.765
RBM39 Cavia porcellus ENSCPOG00000014625 N 0.716
rbm39a Danio rerio ENSDARG00000011613 N 0.768
rbm39b Danio rerio ENSDARG00000041853 N 0.758
RBM39 Equus caballus ENSECAG00000013423 N 0.765
RBM39 Homo sapiens ENSG00000131051 N 0.765
RBM23 Gasterosteus aculeatus ENSGACG00000002797 N 0.725
RBM23 Gasterosteus aculeatus ENSGACG00000003376 N 0.722
RBM39 Gallus gallus ENSGALG00000001550 N 0.769
RBM39 Gorilla gorilla ENSGGOG00000003950 N 0.750
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.765
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.764
RBM39 Microcebus murinus ENSMICG00000001668 N 0.765
RBM39 Monodelphis domestica ENSMODG00000001557 N 0.761
Rbm39 Mus musculus ENSMUSG00000027620 N 0.765
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.765
RBM39 Otolemur garnettii ENSOGAG00000011227 N 0.730
RBM23 Oryzias latipes ENSORLG00000009919 N 0.753
RBM23 Oryzias latipes ENSORLG00000010370 N 0.759
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.765
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.765
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.765
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.765
RBM39 Sorex araneus ENSSARG00000007673 N 0.765
RBM39 Sus scrofa ENSSSCG00000007309 N 0.765
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.769
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.763
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.763
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.765
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.765
rbm39 Xenopus tropicalis ENSXETG00000007434 N 0.765
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.780
estExt_Genewise1Plus.C_150014 Daphnia pulex estExt_Genewise1Plus.C_150014 N 0.832
CG11266 Drosophila melanogaster FBgn0031883 N 0.844
GA10876-RA Drosophila pseudoobscura FBgn0070932 N 0.839
GF14957 Drosophila ananassae FBgn0091982 N 0.844
GG10454 Drosophila erecta FBgn0102763 N 0.849
GH13506 Drosophila grimshawi FBgn0120982 N 0.850
GI10246 Drosophila mojavensis FBgn0133011 N 0.849
GM16278 Drosophila sechellia FBgn0171194 N 0.844
GD23448 Drosophila simulans FBgn0194830 N 0.844
GJ18017 Drosophila virilis FBgn0205182 N 0.836
GK15272 Drosophila willistoni FBgn0217277 N 0.849
GE14328 Drosophila yakuba FBgn0231943 N 0.849
PHUM394230 Pediculus humanus PHUM394230 N 0.893
Sjc_0034270 Schistosoma japonicum Sjc_0034270 N 0.726
Smp_064590 Schistosoma mansoni Smp_064590 N 0.726