CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBMX2
(
Anolis carolinensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSACAG00000008819
T34663_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000008647
RRM
37
107
VFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFICYEDQRSTILAVDNFNGIKIKGRTIR
Links
Other
RRM
family RBPs
Other
Anolis carolinensis
RBPs
93 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
145168
Helobdella robusta
145168
N
0.750
AAEL002461
Aedes aegypti
AAEL002461
N
0.792
AAH56844
Xenopus laevis
AAH56844
N
0.720
AGAP000977
Anopheles gambiae
AGAP000977
N
0.792
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.958
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.819
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.819
Bm1_02690
Brugia malayi
Bm1_02690
N
0.750
CAOG_00327
Capsaspora owczarzaki
CAOG_00327
N
0.778
CPIJ015641
Culex quinquefasciatus
CPIJ015641
N
0.720
CpipJ_CPIJ015641
Culex pipiens
CpipJ_CPIJ015641
N
0.720
DGIL_AUG5s13597g2t1
Acyrtosiphon pisum
DGIL_AUG5s13597g2t1
N
0.736
LOC534630
Bos taurus
ENSBTAG00000006252
N
0.861
LOC613705
Bos taurus
ENSBTAG00000014771
N
0.861
RBMX2
Canis familiaris
ENSCAFG00000018770
N
0.919
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
0.958
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.944
ENSCSAVG00000001047
Ciona savignyi
ENSCSAVG00000001047
N
0.778
rbmx2
Danio rerio
ENSDARG00000044380
N
0.917
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.958
RBMX2
Erinaceus europaeus
ENSEEUG00000000839
N
0.915
RBMX2
Echinops telfairi
ENSETEG00000001763
N
0.930
RBMX2
Homo sapiens
ENSG00000134597
N
0.958
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.917
RBMX2
Gallus gallus
ENSGALG00000004025
N
0.915
ENSGGOG00000016146
Gorilla gorilla
ENSGGOG00000016146
N
0.944
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.958
ENSGGOG00000026106
Gorilla gorilla
ENSGGOG00000026106
N
0.915
RBMX2
Loxodonta africana
ENSLAFG00000017625
N
0.905
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.889
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.944
RBMX2
Meleagris gallopavo
ENSMGAG00000001801
N
0.887
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.958
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.958
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.917
ENSMMUG00000001001
Macaca mulatta
ENSMMUG00000001001
N
0.845
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.958
XP_001110036.1
Macaca mulatta
ENSMMUG00000020845
N
0.944
ENSMODG00000011981
Monodelphis domestica
ENSMODG00000011981
N
0.792
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.972
ENSMODG00000019800
Monodelphis domestica
ENSMODG00000019800
N
0.944
Rbmx2
Mus musculus
ENSMUSG00000031107
N
0.958
RBMX2
Ornithorhynchus anatinus
ENSOANG00000001362
N
0.865
RBMX2
Oryctolagus cuniculus
ENSOCUG00000011809
N
0.904
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.827
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.958
ENSOGAG00000009060
Otolemur garnettii
ENSOGAG00000009060
N
0.915
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.903
RBMX2
Procavia capensis
ENSPCAG00000012903
N
0.915
ENSPPYG00000020717
Pongo pygmaeus
ENSPPYG00000020717
N
0.930
XR_023755.1
Pan troglodytes
ENSPTRG00000022269
N
0.930
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.958
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.944
RBMX2
Sorex araneus
ENSSARG00000007350
N
0.875
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.930
RBMX2
Taeniopygia guttata
ENSTGUG00000005239
N
0.803
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.903
RBMX2
Takifugu rubripes
ENSTRUG00000001699
N
0.917
RBMX2
Tarsius syrichta
ENSTSYG00000010611
N
0.819
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.958
estExt_fgenesh1_pg.C_410012
Monosiga brevicollis
estExt_fgenesh1_pg.C_410012
N
0.708
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.847
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.792
e_gw1.98.15.1
Volvox carteri
e_gw1.98.15.1
N
0.750
CG10466
Drosophila melanogaster
FBgn0032822
N
0.764
GA10331-RA
Drosophila pseudoobscura
FBgn0070389
N
0.792
GF14433
Drosophila ananassae
FBgn0091460
N
0.792
GG21207
Drosophila erecta
FBgn0113387
N
0.778
GH13830
Drosophila grimshawi
FBgn0121306
N
0.764
GI11259
Drosophila mojavensis
FBgn0134020
N
0.778
GI11260
Drosophila mojavensis
FBgn0134021
N
0.778
GI20215
Drosophila mojavensis
FBgn0142951
N
0.778
GL26176
Drosophila persimilis
FBgn0163758
N
0.792
GM17378
Drosophila sechellia
FBgn0172288
N
0.764
GD24233
Drosophila simulans
FBgn0195582
N
0.764
GJ13600
Drosophila virilis
FBgn0200822
N
0.792
GK14925
Drosophila willistoni
FBgn0216930
N
0.792
GE13281
Drosophila yakuba
FBgn0230967
N
0.764
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.750
gw.130.169.1
Nematostella vectensis
gw.130.169.1
N
0.792
gw1.1.2244.1
Trichoplax adhaerens
gw1.1.2244.1
N
0.750
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.806
ISCW009356
Ixodes scapularis
ISCW009356
N
0.722
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.806
PHUM617480
Pediculus humanus
PHUM617480
N
0.819
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.750
Sjc_0109550
Schistosoma japonicum
Sjc_0109550
N
0.720
Smp_170230
Schistosoma mansoni
Smp_170230
N
0.720
SPPG_01752
Spizellomyces punctatus
SPPG_01752
N
0.720
WUBG_13107
Wuchereria bancrofti
WUBG_13107
N
0.750
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.833
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.806
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.833