CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM23
(
Dasypus novemcinctus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDNOG00000002569
T36280_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000001996
RRM
168
236
VFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSHRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPI
ENSDNOP00000001996
RRM
266
312
XVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSNTGCSKGYGFITXX
Links
Other
RRM
family RBPs
Other
Dasypus novemcinctus
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH73374
Xenopus laevis
AAH73374
N
0.714
Ame_R014613
Ailuropoda melanoleuca
Ame_R014613
N
0.786
RBM23
Anolis carolinensis
ENSACAG00000001569
N
0.743
Q0IIK8_BOVIN
Bos taurus
ENSBTAG00000038333
N
0.771
RBM23
Canis familiaris
ENSCAFG00000011217
N
0.786
RBM23
Choloepus hoffmanni
ENSCHOG00000004460
N
0.923
RBM23
Callithrix jacchus
ENSCJAG00000008482
N
0.924
ENSDORG00000004926
Dipodomys ordii
ENSDORG00000004926
N
0.779
LOC100052786
Equus caballus
ENSECAG00000009910
N
0.786
RBM23
Erinaceus europaeus
ENSEEUG00000015560
N
0.771
RBM23
Echinops telfairi
ENSETEG00000017915
N
0.780
RBM23
Felis catus
ENSFCAG00000006632
N
0.909
RBM23
Homo sapiens
ENSG00000100461
N
0.932
RBM23
Gorilla gorilla
ENSGGOG00000015707
N
0.786
RBM23
Loxodonta africana
ENSLAFG00000018567
N
0.757
RBM23
Macropus eugenii
ENSMEUG00000014548
N
0.863
RBM23
Microcebus murinus
ENSMICG00000006364
N
0.779
RBM23
Myotis lucifugus
ENSMLUG00000012923
N
0.764
LOC710066
Macaca mulatta
ENSMMUG00000018381
N
0.932
RBM23
Monodelphis domestica
ENSMODG00000024448
N
0.764
RBM23
Oryctolagus cuniculus
ENSOCUG00000002006
N
0.759
RBM23
Otolemur garnettii
ENSOGAG00000014794
N
0.761
RBM23
Ochotona princeps
ENSOPRG00000001092
N
0.738
RBM23
Oryzias latipes
ENSORLG00000010370
N
0.707
ENSPPYG00000005649
Pongo pygmaeus
ENSPPYG00000005649
N
0.786
RBM23
Pan troglodytes
ENSPTRG00000006151
N
0.932
RBM23
Pteropus vampyrus
ENSPVAG00000013785
N
0.786
RBM23
Sorex araneus
ENSSARG00000005165
N
0.771
RBM23
Takifugu rubripes
ENSTRUG00000011352
N
0.707
RBM23
Tarsius syrichta
ENSTSYG00000014755
N
0.940
RBM23
Tursiops truncatus
ENSTTRG00000001500
N
0.786
RBM23
Vicugna pacos
ENSVPAG00000000599
N
0.940
rbm23
Xenopus tropicalis
ENSXETG00000022623
N
0.729