CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF1
(
Gorilla gorilla
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGGOG00000004106
T37781_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000004031
RRM
45
115
MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGM
ENSGGOP00000004031
RRM
118
160
PIQMKPADSEKNNGCAFVTFTTRAMAQTAIKAMHQAQTMEGCS
ENSGGOP00000004031
RRM
385
455
LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLK
ENSGGOP00000025272
RRM
18
88
MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGM
ENSGGOP00000025272
RRM
132
172
GQHELLTLLLPGCAFVTFTTRAMAQTAIKAMHQAQTMEGCS
ENSGGOP00000025272
RRM
398
471
LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGHTGFVSYDNPVSAQAAIQSMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Gorilla gorilla
RBPs
68 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAB09041
Xenopus laevis
AAB09041
N
0.732
AAC41243
Xenopus laevis
AAC41243
N
0.774
AAH45035
Xenopus laevis
AAH45035
N
0.732
AAH57743
Xenopus laevis
AAH57743
N
0.769
AAH70706
Xenopus laevis
AAH70706
N
0.769
AAI08575
Xenopus laevis
AAI08575
N
0.774
ACH69783
Xenopus laevis
ACH69783
N
0.708
Ame_R009875
Ailuropoda melanoleuca
Ame_R009875
N
0.807
Ame_R017712
Ailuropoda melanoleuca
Ame_R017712
N
0.737
CELF1
Anolis carolinensis
ENSACAG00000002114
N
0.797
CELF2
Anolis carolinensis
ENSACAG00000007661
N
0.737
A7MB95_BOVIN
Bos taurus
ENSBTAG00000002520
N
0.807
Q2KI16_BOVIN
Bos taurus
ENSBTAG00000008937
I
0.723
CELF2
Canis familiaris
ENSCAFG00000004973
N
0.737
CELF1
Canis familiaris
ENSCAFG00000008452
N
0.807
LOC100392717
Callithrix jacchus
ENSCJAG00000020133
N
0.814
LOC100391960
Callithrix jacchus
ENSCJAG00000020663
I
0.737
CELF1
Cavia porcellus
ENSCPOG00000007871
N
0.807
CELF2
Cavia porcellus
ENSCPOG00000012567
N
0.737
celf2
Danio rerio
ENSDARG00000002131
N
0.728
celf1
Danio rerio
ENSDARG00000005315
N
0.741
Celf2
Dipodomys ordii
ENSDORG00000006455
N
0.849
Celf1
Dipodomys ordii
ENSDORG00000013721
N
0.792
CELF2
Equus caballus
ENSECAG00000006649
N
0.737
CELF1
Equus caballus
ENSECAG00000007741
N
0.807
CELF2
Erinaceus europaeus
ENSEEUG00000005658
N
0.737
CELF2
Homo sapiens
ENSG00000048740
N
0.737
CELF1
Homo sapiens
ENSG00000149187
N
0.807
CELF2
Gasterosteus aculeatus
ENSGACG00000004426
N
0.701
CELF2_CHICK
Gallus gallus
ENSGALG00000006713
N
0.737
CELF1_CHICK
Gallus gallus
ENSGALG00000008097
N
0.792
CELF2
Gorilla gorilla
ENSGGOG00000009330
I
0.737
CELF1
Loxodonta africana
ENSLAFG00000003484
N
0.807
CELF2
Loxodonta africana
ENSLAFG00000013612
N
0.737
CELF1
Macropus eugenii
ENSMEUG00000007763
N
0.797
CELF1
Meleagris gallopavo
ENSMGAG00000010629
N
0.792
CELF1
Microcebus murinus
ENSMICG00000007157
N
0.755
CELF2
Microcebus murinus
ENSMICG00000007867
N
0.737
CELF2
Macaca mulatta
ENSMMUG00000011468
N
0.737
CELF1
Macaca mulatta
ENSMMUG00000011657
N
0.807
CELF1
Monodelphis domestica
ENSMODG00000019913
N
0.797
Celf2
Mus musculus
ENSMUSG00000002107
N
0.737
Celf1
Mus musculus
ENSMUSG00000005506
N
0.797
CELF1
Ornithorhynchus anatinus
ENSOANG00000007896
N
0.797
CELF1
Oryctolagus cuniculus
ENSOCUG00000001311
N
0.807
CELF2
Oryctolagus cuniculus
ENSOCUG00000004961
N
0.737
CELF1
Ochotona princeps
ENSOPRG00000003239
N
0.792
CELF2
Ochotona princeps
ENSOPRG00000011502
N
0.737
CELF1
Procavia capensis
ENSPCAG00000002631
N
0.769
ENSPPYG00000002083
Pongo pygmaeus
ENSPPYG00000002083
N
0.737
ENSPPYG00000003302
Pongo pygmaeus
ENSPPYG00000003302
N
0.797
CELF2
Pan troglodytes
ENSPTRG00000002284
N
0.737
Cugbp1
Rattus norvegicus
ENSRNOG00000010379
N
0.797
Cugbp2
Rattus norvegicus
ENSRNOG00000023661
N
0.737
CELF2
Tupaia belangeri
ENSTBEG00000007939
N
0.737
CUGBP2-1
Taeniopygia guttata
ENSTGUG00000002136
N
0.737
CUGBP1
Taeniopygia guttata
ENSTGUG00000010377
N
0.792
CELF2
Tetraodon nigroviridis
ENSTNIG00000007201
N
0.728
CELF1
Takifugu rubripes
ENSTRUG00000001711
N
0.736
CELF2
Takifugu rubripes
ENSTRUG00000010147
N
0.728
CELF1
Tursiops truncatus
ENSTTRG00000014157
N
0.807
CELF1
Vicugna pacos
ENSVPAG00000000336
N
0.807
celf1
Xenopus tropicalis
ENSXETG00000009044
N
0.783
celf2
Xenopus tropicalis
ENSXETG00000021992
N
0.732
O57406
Xenopus laevis
O57406
N
0.774
Q6PF35
Xenopus laevis
Q6PF35
N
0.769
Q7ZXE2
Xenopus laevis
Q7ZXE2
N
0.732