Q6PF35 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Q6PF35 T59745_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Q6PF35 RRM 18 88
Q6PF35 RRM 110 178
Q6PF35 RRM 406 476

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

89 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH70706 Xenopus laevis AAH70706 N 1.000
AAH57743 Xenopus laevis AAH57743 N 1.000
celf1 Xenopus tropicalis ENSXETG00000009044 N 0.972
AAC41243 Xenopus laevis AAC41243 N 0.953
AAI08575 Xenopus laevis AAI08575 N 0.953
O57406 Xenopus laevis O57406 N 0.953
CELF1 Ornithorhynchus anatinus ENSOANG00000007896 N 0.943
CELF1 Macropus eugenii ENSMEUG00000007763 N 0.934
CELF1 Monodelphis domestica ENSMODG00000019913 N 0.934
CELF1 Anolis carolinensis ENSACAG00000002114 N 0.934
CELF1 Equus caballus ENSECAG00000007741 N 0.929
CELF1_CHICK Gallus gallus ENSGALG00000008097 N 0.929
CELF1 Oryctolagus cuniculus ENSOCUG00000001311 N 0.929
CELF1 Macaca mulatta ENSMMUG00000011657 N 0.929
CELF1 Loxodonta africana ENSLAFG00000003484 N 0.929
CELF1 Homo sapiens ENSG00000149187 N 0.929
CELF1 Tursiops truncatus ENSTTRG00000014157 N 0.929
CELF1 Cavia porcellus ENSCPOG00000007871 N 0.929
A7MB95_BOVIN Bos taurus ENSBTAG00000002520 N 0.929
LOC100392717 Callithrix jacchus ENSCJAG00000020133 N 0.929
Ame_R009875 Ailuropoda melanoleuca Ame_R009875 N 0.929
CELF1 Canis familiaris ENSCAFG00000008452 N 0.929
CELF1 Meleagris gallopavo ENSMGAG00000010629 N 0.929
CELF1 Vicugna pacos ENSVPAG00000000336 N 0.929
CUGBP1 Taeniopygia guttata ENSTGUG00000010377 N 0.929
Cugbp1 Rattus norvegicus ENSRNOG00000010379 N 0.924
Celf1 Mus musculus ENSMUSG00000005506 N 0.924
ENSPPYG00000003302 Pongo pygmaeus ENSPPYG00000003302 N 0.919
CELF1 Ochotona princeps ENSOPRG00000003239 N 0.915
Celf1 Dipodomys ordii ENSDORG00000013721 N 0.915
CELF1 Procavia capensis ENSPCAG00000002631 N 0.900
CELF2 Equus caballus ENSECAG00000006649 N 0.892
CELF2 Pan troglodytes ENSPTRG00000002284 N 0.892
ENSPPYG00000002083 Pongo pygmaeus ENSPPYG00000002083 N 0.892
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.892
CELF2 Ochotona princeps ENSOPRG00000011502 N 0.892
CELF2 Oryctolagus cuniculus ENSOCUG00000004961 N 0.892
CELF2 Tupaia belangeri ENSTBEG00000007939 N 0.892
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.892
CELF2 Anolis carolinensis ENSACAG00000007661 N 0.892
CELF2 Canis familiaris ENSCAFG00000004973 N 0.892
Ame_R017712 Ailuropoda melanoleuca Ame_R017712 N 0.892
CUGBP2-1 Taeniopygia guttata ENSTGUG00000002136 N 0.892
CELF2 Cavia porcellus ENSCPOG00000012567 N 0.892
CELF2 Erinaceus europaeus ENSEEUG00000005658 N 0.892
Cugbp2 Rattus norvegicus ENSRNOG00000023661 N 0.892
CELF2 Homo sapiens ENSG00000048740 N 0.892
CELF2 Microcebus murinus ENSMICG00000007867 N 0.892
CELF2 Macaca mulatta ENSMMUG00000011468 N 0.892
Celf2 Mus musculus ENSMUSG00000002107 N 0.892
CELF2 Loxodonta africana ENSLAFG00000013612 N 0.892
CELF2_CHICK Gallus gallus ENSGALG00000006713 N 0.892
AAH45035 Xenopus laevis AAH45035 N 0.887
Q7ZXE2 Xenopus laevis Q7ZXE2 N 0.887
celf2 Xenopus tropicalis ENSXETG00000021992 N 0.887
AAB09041 Xenopus laevis AAB09041 N 0.887
CELF1 Microcebus murinus ENSMICG00000007157 N 0.882
CELF1 Takifugu rubripes ENSTRUG00000001711 N 0.882
CELF2 Tetraodon nigroviridis ENSTNIG00000007201 N 0.878
CELF2 Takifugu rubripes ENSTRUG00000010147 N 0.878
celf2 Danio rerio ENSDARG00000002131 N 0.873
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.873
celf1 Danio rerio ENSDARG00000005315 N 0.872
ACH69783 Xenopus laevis ACH69783 N 0.860
CELF2 Choloepus hoffmanni ENSCHOG00000002945 N 0.845
CELF2 Tetraodon nigroviridis ENSTNIG00000016009 N 0.836
CELF2 Takifugu rubripes ENSTRUG00000016905 N 0.831
CELF2 Gasterosteus aculeatus ENSGACG00000004426 N 0.822
CELF2 Oryzias latipes ENSORLG00000003894 N 0.822
CELF1 Pan troglodytes ENSPTRG00000003568 N 0.801
CELF1 Erinaceus europaeus ENSEEUG00000009782 N 0.801
CELF1 Sorex araneus ENSSARG00000003207 N 0.801
CELF1 Gasterosteus aculeatus ENSGACG00000014226 N 0.797
CELF1 Choloepus hoffmanni ENSCHOG00000004196 N 0.788
CELF1 Dasypus novemcinctus ENSDNOG00000009523 N 0.787
CELF1 Tupaia belangeri ENSTBEG00000005140 N 0.787
CELF1 Myotis lucifugus ENSMLUG00000016631 N 0.778
CELF1 Gorilla gorilla ENSGGOG00000004106 N 0.769
CELF2 Procavia capensis ENSPCAG00000010882 N 0.759
CELF2 Macropus eugenii ENSMEUG00000015276 N 0.755
CELF2 Tursiops truncatus ENSTTRG00000014665 N 0.741
CELF1 Pteropus vampyrus ENSPVAG00000007340 N 0.735
CELF1 Tarsius syrichta ENSTSYG00000003866 N 0.735
e_gw.91.28.1 Branchiostoma floridae e_gw.91.28.1 I 0.731
CELF2 Oryzias latipes ENSORLG00000017111 N 0.728
Celf2 Dipodomys ordii ENSDORG00000006455 N 0.722
CELF2 Monodelphis domestica ENSMODG00000016763 N 0.712
CELF2 Vicugna pacos ENSVPAG00000009360 N 0.708
CELF2 Tarsius syrichta ENSTSYG00000005118 N 0.708