CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF1
(
Meleagris gallopavo
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMGAG00000010629
T38412_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000011060
RRM
18
88
MFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKILPGM
ENSMGAP00000011060
RRM
110
178
LFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCS
ENSMGAP00000011060
RRM
406
476
LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Meleagris gallopavo
RBPs
91 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CUGBP1
Taeniopygia guttata
ENSTGUG00000010377
N
1.000
CELF1_CHICK
Gallus gallus
ENSGALG00000008097
N
1.000
CELF1
Anolis carolinensis
ENSACAG00000002114
N
0.991
CELF1
Macropus eugenii
ENSMEUG00000007763
N
0.991
CELF1
Monodelphis domestica
ENSMODG00000019913
N
0.991
CELF1
Ornithorhynchus anatinus
ENSOANG00000007896
N
0.981
A7MB95_BOVIN
Bos taurus
ENSBTAG00000002520
N
0.976
CELF1
Vicugna pacos
ENSVPAG00000000336
N
0.976
CELF1
Tursiops truncatus
ENSTTRG00000014157
N
0.976
CELF1
Canis familiaris
ENSCAFG00000008452
N
0.976
CELF1
Cavia porcellus
ENSCPOG00000007871
N
0.976
CELF1
Loxodonta africana
ENSLAFG00000003484
N
0.976
CELF1
Homo sapiens
ENSG00000149187
N
0.976
CELF1
Equus caballus
ENSECAG00000007741
N
0.976
LOC100392717
Callithrix jacchus
ENSCJAG00000020133
N
0.976
Ame_R009875
Ailuropoda melanoleuca
Ame_R009875
N
0.976
CELF1
Macaca mulatta
ENSMMUG00000011657
N
0.976
CELF1
Oryctolagus cuniculus
ENSOCUG00000001311
N
0.976
Celf1
Mus musculus
ENSMUSG00000005506
N
0.967
ENSPPYG00000003302
Pongo pygmaeus
ENSPPYG00000003302
N
0.967
Cugbp1
Rattus norvegicus
ENSRNOG00000010379
N
0.967
CELF1
Ochotona princeps
ENSOPRG00000003239
N
0.962
Celf1
Dipodomys ordii
ENSDORG00000013721
N
0.962
celf1
Xenopus tropicalis
ENSXETG00000009044
N
0.943
AAC41243
Xenopus laevis
AAC41243
N
0.943
AAI08575
Xenopus laevis
AAI08575
N
0.943
O57406
Xenopus laevis
O57406
N
0.943
CELF1
Procavia capensis
ENSPCAG00000002631
N
0.938
CELF1
Microcebus murinus
ENSMICG00000007157
N
0.929
AAH57743
Xenopus laevis
AAH57743
N
0.929
AAH70706
Xenopus laevis
AAH70706
N
0.929
Q6PF35
Xenopus laevis
Q6PF35
N
0.929
Celf2
Mus musculus
ENSMUSG00000002107
N
0.925
CELF2
Ochotona princeps
ENSOPRG00000011502
N
0.925
CELF2
Canis familiaris
ENSCAFG00000004973
N
0.925
Ame_R017712
Ailuropoda melanoleuca
Ame_R017712
N
0.925
CELF2
Anolis carolinensis
ENSACAG00000007661
N
0.925
LOC100391960
Callithrix jacchus
ENSCJAG00000020663
I
0.925
CELF2
Oryctolagus cuniculus
ENSOCUG00000004961
N
0.925
CELF2
Cavia porcellus
ENSCPOG00000012567
N
0.925
Cugbp2
Rattus norvegicus
ENSRNOG00000023661
N
0.925
CELF2
Macaca mulatta
ENSMMUG00000011468
N
0.925
CELF2_CHICK
Gallus gallus
ENSGALG00000006713
N
0.925
CELF2
Gorilla gorilla
ENSGGOG00000009330
I
0.925
CELF2
Loxodonta africana
ENSLAFG00000013612
N
0.925
CELF2
Microcebus murinus
ENSMICG00000007867
N
0.925
ENSPPYG00000002083
Pongo pygmaeus
ENSPPYG00000002083
N
0.925
CELF2
Pan troglodytes
ENSPTRG00000002284
N
0.925
CELF2
Tupaia belangeri
ENSTBEG00000007939
N
0.925
CUGBP2-1
Taeniopygia guttata
ENSTGUG00000002136
N
0.925
CELF2
Homo sapiens
ENSG00000048740
N
0.925
CELF2
Erinaceus europaeus
ENSEEUG00000005658
N
0.925
CELF2
Equus caballus
ENSECAG00000006649
N
0.925
CELF1
Takifugu rubripes
ENSTRUG00000001711
N
0.924
celf2
Xenopus tropicalis
ENSXETG00000021992
N
0.920
Q7ZXE2
Xenopus laevis
Q7ZXE2
N
0.920
AAB09041
Xenopus laevis
AAB09041
N
0.920
AAH45035
Xenopus laevis
AAH45035
N
0.920
celf1
Danio rerio
ENSDARG00000005315
N
0.915
celf2
Danio rerio
ENSDARG00000002131
N
0.906
CELF2
Tetraodon nigroviridis
ENSTNIG00000007201
N
0.906
CELF2
Takifugu rubripes
ENSTRUG00000010147
N
0.906
Q2KI16_BOVIN
Bos taurus
ENSBTAG00000008937
I
0.906
ACH69783
Xenopus laevis
ACH69783
N
0.893
CELF2
Choloepus hoffmanni
ENSCHOG00000002945
N
0.878
CELF2
Gasterosteus aculeatus
ENSGACG00000004426
N
0.850
CELF2
Tetraodon nigroviridis
ENSTNIG00000016009
N
0.850
CELF2
Oryzias latipes
ENSORLG00000003894
N
0.845
CELF2
Takifugu rubripes
ENSTRUG00000016905
N
0.845
CELF1
Sorex araneus
ENSSARG00000003207
N
0.834
CELF1
Pan troglodytes
ENSPTRG00000003568
N
0.834
CELF1
Tupaia belangeri
ENSTBEG00000005140
N
0.834
CELF1
Erinaceus europaeus
ENSEEUG00000009782
N
0.834
CELF1
Choloepus hoffmanni
ENSCHOG00000004196
N
0.830
CELF1
Gasterosteus aculeatus
ENSGACG00000014226
N
0.825
CELF1
Myotis lucifugus
ENSMLUG00000016631
N
0.821
CELF1
Dasypus novemcinctus
ENSDNOG00000009523
N
0.820
CELF1
Gorilla gorilla
ENSGGOG00000004106
N
0.792
CELF2
Procavia capensis
ENSPCAG00000010882
N
0.788
CELF2
Macropus eugenii
ENSMEUG00000015276
N
0.783
CELF1
Pteropus vampyrus
ENSPVAG00000007340
N
0.782
CELF1
Tarsius syrichta
ENSTSYG00000003866
N
0.782
CELF2
Tursiops truncatus
ENSTTRG00000014665
N
0.769
e_gw.91.28.1
Branchiostoma floridae
e_gw.91.28.1
I
0.769
CELF2
Monodelphis domestica
ENSMODG00000016763
N
0.755
CELF2
Tarsius syrichta
ENSTSYG00000005118
N
0.750
CELF2
Vicugna pacos
ENSVPAG00000009360
N
0.750
CELF2
Oryzias latipes
ENSORLG00000017111
N
0.742
CELF1
Takifugu rubripes
ENSTRUG00000000617
N
0.736
Celf2
Dipodomys ordii
ENSDORG00000006455
N
0.736
CELF2
Echinops telfairi
ENSETEG00000008414
N
0.715