celf1 (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000005315 T36041_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000026582 RRM 18 88
ENSDARP00000026582 RRM 110 178
ENSDARP00000026582 RRM 418 488
ENSDARP00000041054 RRM 56 126
ENSDARP00000041054 RRM 148 215
ENSDARP00000041054 RRM 451 521

Links

Other RRM family RBPs
Other Danio rerio RBPs

91 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CELF1 Takifugu rubripes ENSTRUG00000001711 N 0.976
CELF1 Macropus eugenii ENSMEUG00000007763 N 0.915
CELF1 Anolis carolinensis ENSACAG00000002114 N 0.915
CELF1_CHICK Gallus gallus ENSGALG00000008097 N 0.915
CELF1 Meleagris gallopavo ENSMGAG00000010629 N 0.915
CUGBP1 Taeniopygia guttata ENSTGUG00000010377 N 0.915
CELF1 Monodelphis domestica ENSMODG00000019913 N 0.915
CELF1 Vicugna pacos ENSVPAG00000000336 N 0.910
CELF1 Oryctolagus cuniculus ENSOCUG00000001311 N 0.910
CELF1 Ornithorhynchus anatinus ENSOANG00000007896 N 0.910
CELF1 Tursiops truncatus ENSTTRG00000014157 N 0.910
CELF1 Macaca mulatta ENSMMUG00000011657 N 0.910
Ame_R009875 Ailuropoda melanoleuca Ame_R009875 N 0.910
CELF1 Loxodonta africana ENSLAFG00000003484 N 0.910
CELF1 Canis familiaris ENSCAFG00000008452 N 0.910
LOC100392717 Callithrix jacchus ENSCJAG00000020133 N 0.910
CELF1 Cavia porcellus ENSCPOG00000007871 N 0.910
A7MB95_BOVIN Bos taurus ENSBTAG00000002520 N 0.910
CELF1 Equus caballus ENSECAG00000007741 N 0.910
CELF1 Homo sapiens ENSG00000149187 N 0.910
Celf1 Mus musculus ENSMUSG00000005506 N 0.905
Cugbp1 Rattus norvegicus ENSRNOG00000010379 N 0.905
ENSPPYG00000003302 Pongo pygmaeus ENSPPYG00000003302 N 0.900
CELF2 Ochotona princeps ENSOPRG00000011502 N 0.896
CELF2 Cavia porcellus ENSCPOG00000012567 N 0.896
CUGBP2-1 Taeniopygia guttata ENSTGUG00000002136 N 0.896
ENSPPYG00000002083 Pongo pygmaeus ENSPPYG00000002083 N 0.896
CELF2 Pan troglodytes ENSPTRG00000002284 N 0.896
Ame_R017712 Ailuropoda melanoleuca Ame_R017712 N 0.896
CELF2 Anolis carolinensis ENSACAG00000007661 N 0.896
CELF2 Canis familiaris ENSCAFG00000004973 N 0.896
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.896
CELF2 Tupaia belangeri ENSTBEG00000007939 N 0.896
Cugbp2 Rattus norvegicus ENSRNOG00000023661 N 0.896
CELF2 Loxodonta africana ENSLAFG00000013612 N 0.896
CELF2 Microcebus murinus ENSMICG00000007867 N 0.896
CELF2_CHICK Gallus gallus ENSGALG00000006713 N 0.896
CELF2 Homo sapiens ENSG00000048740 N 0.896
CELF2 Equus caballus ENSECAG00000006649 N 0.896
CELF2 Erinaceus europaeus ENSEEUG00000005658 N 0.896
CELF2 Macaca mulatta ENSMMUG00000011468 N 0.896
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.896
Celf2 Mus musculus ENSMUSG00000002107 N 0.896
CELF2 Oryctolagus cuniculus ENSOCUG00000004961 N 0.896
celf1 Xenopus tropicalis ENSXETG00000009044 N 0.896
O57406 Xenopus laevis O57406 N 0.896
CELF1 Ochotona princeps ENSOPRG00000003239 N 0.896
Celf1 Dipodomys ordii ENSDORG00000013721 N 0.896
AAC41243 Xenopus laevis AAC41243 N 0.896
AAI08575 Xenopus laevis AAI08575 N 0.896
AAH45035 Xenopus laevis AAH45035 N 0.892
celf2 Xenopus tropicalis ENSXETG00000021992 N 0.892
Q7ZXE2 Xenopus laevis Q7ZXE2 N 0.892
AAB09041 Xenopus laevis AAB09041 N 0.892
CELF1 Procavia capensis ENSPCAG00000002631 N 0.886
CELF1 Gasterosteus aculeatus ENSGACG00000014226 N 0.882
celf2 Danio rerio ENSDARG00000002131 N 0.878
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.877
AAH70706 Xenopus laevis AAH70706 N 0.872
AAH57743 Xenopus laevis AAH57743 N 0.872
Q6PF35 Xenopus laevis Q6PF35 N 0.872
CELF2 Tetraodon nigroviridis ENSTNIG00000007201 N 0.869
CELF2 Takifugu rubripes ENSTRUG00000010147 N 0.869
ACH69783 Xenopus laevis ACH69783 N 0.865
CELF1 Microcebus murinus ENSMICG00000007157 N 0.863
CELF2 Choloepus hoffmanni ENSCHOG00000002945 N 0.845
CELF2 Gasterosteus aculeatus ENSGACG00000004426 N 0.831
CELF2 Takifugu rubripes ENSTRUG00000016905 N 0.826
CELF2 Tetraodon nigroviridis ENSTNIG00000016009 N 0.826
CELF2 Oryzias latipes ENSORLG00000003894 N 0.817
CELF1 Erinaceus europaeus ENSEEUG00000009782 N 0.791
CELF1 Pan troglodytes ENSPTRG00000003568 N 0.791
CELF1 Sorex araneus ENSSARG00000003207 N 0.791
CELF1 Takifugu rubripes ENSTRUG00000000617 N 0.783
CELF1 Dasypus novemcinctus ENSDNOG00000009523 N 0.777
CELF1 Tupaia belangeri ENSTBEG00000005140 N 0.777
CELF1 Choloepus hoffmanni ENSCHOG00000004196 N 0.769
CELF2 Procavia capensis ENSPCAG00000010882 N 0.769
CELF2 Macropus eugenii ENSMEUG00000015276 N 0.764
CELF1 Myotis lucifugus ENSMLUG00000016631 N 0.759
e_gw.91.28.1 Branchiostoma floridae e_gw.91.28.1 I 0.755
CELF2 Tursiops truncatus ENSTTRG00000014665 N 0.750
CELF1 Gorilla gorilla ENSGGOG00000004106 N 0.741
CELF2 Monodelphis domestica ENSMODG00000016763 N 0.726
CELF1 Tarsius syrichta ENSTSYG00000003866 N 0.725
CELF1 Pteropus vampyrus ENSPVAG00000007340 N 0.725
Celf2 Dipodomys ordii ENSDORG00000006455 N 0.722
CELF2 Vicugna pacos ENSVPAG00000009360 N 0.717
CELF2 Tarsius syrichta ENSTSYG00000005118 N 0.717
CELF2 Oryzias latipes ENSORLG00000017111 N 0.714