RBMXL3 (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000016844 T42154_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMX
M344_0.6 		Homo sapiens CCM SELEX
Cook et al.(2011)
922_19282290 		0.873
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000019957 RRM 10 80

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH70649 Xenopus laevis AAH70649 I 0.845
Ame_R008043 Ailuropoda melanoleuca Ame_R008043 I 0.873
Ame_R020019 Ailuropoda melanoleuca Ame_R020019 I 0.704
ENSACAG00000009551 Anolis carolinensis ENSACAG00000009551 I 0.873
HNRPG_BOVIN Bos taurus ENSBTAG00000011807 I 0.803
D3JUI8_BOVIN Bos taurus ENSBTAG00000013308 I 0.873
HNRPG_BOVIN Bos taurus ENSBTAG00000036140 I 0.803
RBMXL1 Canis familiaris ENSCAFG00000018962 I 0.861
LOC100406653 Callithrix jacchus ENSCJAG00000003626 I 0.873
RBMXL3 Callithrix jacchus ENSCJAG00000006948 I 0.704
ENSCJAG00000013619 Callithrix jacchus ENSCJAG00000013619 I 0.789
ENSCJAG00000016247 Callithrix jacchus ENSCJAG00000016247 I 0.761
LOC100415631 Callithrix jacchus ENSCJAG00000022240 I 0.817
RBMXL1 Callithrix jacchus ENSCJAG00000032899 I 0.873
RBMX Cavia porcellus ENSCPOG00000012164 I 0.873
rbmx Danio rerio ENSDARG00000014244 I 0.831
ENSDNOG00000009042 Dasypus novemcinctus ENSDNOG00000009042 I 0.775
RBMXL1 Dasypus novemcinctus ENSDNOG00000017199 I 0.873
Rbmxl2 Dipodomys ordii ENSDORG00000010267 I 0.817
LOC100054583 Equus caballus ENSECAG00000021380 I 0.873
RBMX Felis catus ENSFCAG00000004779 I 0.761
RBMX Homo sapiens ENSG00000147274 D 0.873
RBMXL2 Homo sapiens ENSG00000170748 I 0.845
RBMXL3 Homo sapiens ENSG00000175718 I 0.746
RBMXL1 Homo sapiens ENSG00000213516 I 0.859
RBMXL3 Gasterosteus aculeatus ENSGACG00000017237 I 0.944
Q5ZKQ9_CHICK Gallus gallus ENSGALG00000006457 I 0.873
Q2VIN1_9PRIM Gorilla gorilla ENSGGOG00000012016 I 0.859
RBMXL3 Gorilla gorilla ENSGGOG00000027260 I 0.732
RBMXL1 Gorilla gorilla ENSGGOG00000027619 I 0.873
ENSLAFG00000005568 Loxodonta africana ENSLAFG00000005568 I 0.873
ENSLAFG00000014037 Loxodonta africana ENSLAFG00000014037 I 0.789
ENSLAFG00000020807 Loxodonta africana ENSLAFG00000020807 I 0.761
ENSLAFG00000022169 Loxodonta africana ENSLAFG00000022169 I 0.831
O97560_MACEU Macropus eugenii ENSMEUG00000013834 I 0.817
ENSMEUG00000015892 Macropus eugenii ENSMEUG00000015892 I 0.817
RBMX Meleagris gallopavo ENSMGAG00000003594 I 0.873
RBMXL1 Microcebus murinus ENSMICG00000006856 I 0.873
RBMXL1 Myotis lucifugus ENSMLUG00000013209 I 0.873
XM_001367159.1 Monodelphis domestica ENSMODG00000014054 I 0.817
Rbmx Mus musculus ENSMUSG00000031134 I 0.873
Rbmxrt Mus musculus ENSMUSG00000037070 I 0.859
ENSMUSG00000049235 Mus musculus ENSMUSG00000049235 I 0.859
Rbmxl2 Mus musculus ENSMUSG00000073894 I 0.803
ENSOANG00000011670 Ornithorhynchus anatinus ENSOANG00000011670 I 0.873
RBMXL1 Oryctolagus cuniculus ENSOCUG00000007220 I 0.873
ENSOCUG00000021095 Oryctolagus cuniculus ENSOCUG00000021095 I 0.831
RBMX Oryctolagus cuniculus ENSOCUG00000024093 I 0.873
ENSOCUG00000028230 Oryctolagus cuniculus ENSOCUG00000028230 I 0.873
RBMXL3 Oryzias latipes ENSORLG00000001692 I 0.944
ENSPPYG00000001177 Pongo pygmaeus ENSPPYG00000001177 I 0.859
ENSPPYG00000019152 Pongo pygmaeus ENSPPYG00000019152 I 0.831
ENSPPYG00000020771 Pongo pygmaeus ENSPPYG00000020771 I 0.873
HNRPG_PANTR Pan troglodytes ENSPTRG00000000933 I 0.859
RBMXL2 Pan troglodytes ENSPTRG00000003312 I 0.845
XR_023586.1 Pan troglodytes ENSPTRG00000004121 I 0.845
RBMX Pan troglodytes ENSPTRG00000034071 I 0.817
Rbmx Rattus norvegicus ENSRNOG00000000866 I 0.873
Rbmxrtl Rattus norvegicus ENSRNOG00000012138 I 0.845
D3ZT57_RAT Rattus norvegicus ENSRNOG00000021946 I 0.775
D4AE41_RAT Rattus norvegicus ENSRNOG00000028858 I 0.845
RBMXL1 Sus scrofa ENSSSCG00000012703 I 0.873
ENSTBEG00000001154 Tupaia belangeri ENSTBEG00000001154 I 0.775
RBMX Taeniopygia guttata ENSTGUG00000002135 I 0.873
RBMXL3 Takifugu rubripes ENSTRUG00000006031 I 0.986
RBMX Tarsius syrichta ENSTSYG00000009555 I 0.859
ENSTTRG00000003238 Tursiops truncatus ENSTTRG00000003238 I 0.775
RBMXL1 Tursiops truncatus ENSTTRG00000007322 I 0.873
ENSVPAG00000002726 Vicugna pacos ENSVPAG00000002726 I 0.775
RBMXL1 Vicugna pacos ENSVPAG00000005826 I 0.873