D3ZT57_RAT (Rattus norvegicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSRNOG00000021946 T41148_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMX
M344_0.6 		Homo sapiens CCM SELEX
Cook et al.(2011)
922_19282290 		0.845
RBMY1A1
M247_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1053_17318228 		0.761
RBMY1A1
M246_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1052_17318228 		0.761
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000028551 RRM 10 79
ENSRNOP00000041798 RRM 10 79

Links

Other RRM family RBPs
Other Rattus norvegicus RBPs

82 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Rbmxl2 Mus musculus ENSMUSG00000073894 I 0.972
ENSOCUG00000021095 Oryctolagus cuniculus ENSOCUG00000021095 I 0.915
Rbmxl2 Dipodomys ordii ENSDORG00000010267 I 0.887
RBMXL2 Pan troglodytes ENSPTRG00000003312 I 0.887
RBMXL2 Homo sapiens ENSG00000170748 I 0.887
ENSTTRG00000003238 Tursiops truncatus ENSTTRG00000003238 I 0.859
HNRPG_BOVIN Bos taurus ENSBTAG00000036140 I 0.859
HNRPG_BOVIN Bos taurus ENSBTAG00000011807 I 0.859
LOC100415631 Callithrix jacchus ENSCJAG00000022240 I 0.859
ENSLAFG00000005568 Loxodonta africana ENSLAFG00000005568 I 0.845
RBMXL1 Gorilla gorilla ENSGGOG00000027619 I 0.845
Q5ZKQ9_CHICK Gallus gallus ENSGALG00000006457 I 0.845
LOC100054583 Equus caballus ENSECAG00000021380 I 0.845
RBMX Homo sapiens ENSG00000147274 D 0.845
Q2VIN1_9PRIM Gorilla gorilla ENSGGOG00000012016 I 0.845
RBMXL1 Myotis lucifugus ENSMLUG00000013209 I 0.845
ENSOCUG00000028230 Oryctolagus cuniculus ENSOCUG00000028230 I 0.845
ENSPPYG00000001177 Pongo pygmaeus ENSPPYG00000001177 I 0.845
ENSPPYG00000020771 Pongo pygmaeus ENSPPYG00000020771 I 0.845
HNRPG_PANTR Pan troglodytes ENSPTRG00000000933 I 0.845
RBMX Oryctolagus cuniculus ENSOCUG00000024093 I 0.845
RBMXL1 Oryctolagus cuniculus ENSOCUG00000007220 I 0.845
RBMXL1 Microcebus murinus ENSMICG00000006856 I 0.845
Rbmx Mus musculus ENSMUSG00000031134 I 0.845
ENSOANG00000011670 Ornithorhynchus anatinus ENSOANG00000011670 I 0.845
RBMX Meleagris gallopavo ENSMGAG00000003594 I 0.845
RBMXL1 Homo sapiens ENSG00000213516 I 0.845
Ame_R008043 Ailuropoda melanoleuca Ame_R008043 I 0.845
RBMXL1 Callithrix jacchus ENSCJAG00000032899 I 0.845
Rbmx Rattus norvegicus ENSRNOG00000000866 I 0.845
LOC100406653 Callithrix jacchus ENSCJAG00000003626 I 0.845
ENSACAG00000009551 Anolis carolinensis ENSACAG00000009551 I 0.845
D3JUI8_BOVIN Bos taurus ENSBTAG00000013308 I 0.845
RBMXL1 Dasypus novemcinctus ENSDNOG00000017199 I 0.845
RBMXL1 Tursiops truncatus ENSTTRG00000007322 I 0.845
RBMXL1 Vicugna pacos ENSVPAG00000005826 I 0.845
RBMXL1 Sus scrofa ENSSSCG00000012703 I 0.845
RBMX Cavia porcellus ENSCPOG00000012164 I 0.845
RBMX Taeniopygia guttata ENSTGUG00000002135 I 0.845
RBMXL1 Canis familiaris ENSCAFG00000018962 I 0.833
ENSLAFG00000014037 Loxodonta africana ENSLAFG00000014037 I 0.831
RBMX Tarsius syrichta ENSTSYG00000009555 I 0.831
ENSMUSG00000049235 Mus musculus ENSMUSG00000049235 I 0.831
Rbmxrt Mus musculus ENSMUSG00000037070 I 0.831
Rbmxrtl Rattus norvegicus ENSRNOG00000012138 I 0.817
D4AE41_RAT Rattus norvegicus ENSRNOG00000028858 I 0.817
XR_023586.1 Pan troglodytes ENSPTRG00000004121 I 0.803
XM_001367159.1 Monodelphis domestica ENSMODG00000014054 I 0.803
ENSPPYG00000019152 Pongo pygmaeus ENSPPYG00000019152 I 0.803
ENSMEUG00000015892 Macropus eugenii ENSMEUG00000015892 I 0.803
ENSLAFG00000022169 Loxodonta africana ENSLAFG00000022169 I 0.803
O97560_MACEU Macropus eugenii ENSMEUG00000013834 I 0.803
RBMXL3 Homo sapiens ENSG00000175718 I 0.789
RBMXL3 Takifugu rubripes ENSTRUG00000006031 I 0.789
RBMXL3 Oryzias latipes ENSORLG00000001692 I 0.789
RBMXL3 Gasterosteus aculeatus ENSGACG00000017237 I 0.789
RBMX Pan troglodytes ENSPTRG00000034071 I 0.789
RBMXL3 Tetraodon nigroviridis ENSTNIG00000016844 I 0.775
ENSDNOG00000009042 Dasypus novemcinctus ENSDNOG00000009042 I 0.775
RBMXL3 Gorilla gorilla ENSGGOG00000027260 I 0.775
ENSPTRG00000032590 Pan troglodytes ENSPTRG00000032590 I 0.761
rbmx Danio rerio ENSDARG00000014244 I 0.761
LOC750990 Pan troglodytes ENSPTRG00000028802 I 0.761
XR_020159.1 Pan troglodytes ENSPTRG00000032591 I 0.761
XR_020119.1 Pan troglodytes ENSPTRG00000028826 I 0.761
AAH70649 Xenopus laevis AAH70649 I 0.761
ENSLAFG00000020807 Loxodonta africana ENSLAFG00000020807 I 0.761
ENSCJAG00000016247 Callithrix jacchus ENSCJAG00000016247 I 0.761
ENSPTRG00000028821 Pan troglodytes ENSPTRG00000028821 I 0.761
Q52NW1_PANTR Pan troglodytes ENSPTRG00000028822 I 0.761
XR_019934.1 Pan troglodytes ENSPTRG00000032589 I 0.761
RBMY1D Homo sapiens ENSG00000244395 I 0.746
RBMX Felis catus ENSFCAG00000004779 I 0.746
ENSCJAG00000013619 Callithrix jacchus ENSCJAG00000013619 I 0.746
RBMY1B Homo sapiens ENSG00000242875 I 0.746
RBMY1F Homo sapiens ENSG00000169800 I 0.746
RBMY1J Homo sapiens ENSG00000226941 I 0.746
RBMY1E Homo sapiens ENSG00000242389 I 0.746
RBMY1A1 Homo sapiens ENSG00000234414 D 0.746
ENSTBEG00000001154 Tupaia belangeri ENSTBEG00000001154 I 0.732
ENSVPAG00000002726 Vicugna pacos ENSVPAG00000002726 I 0.732