GJ13600 (Drosophila virilis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0200822 T44048_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0228017 RRM 36 106

Links

Other RRM family RBPs
Other Drosophila virilis RBPs

89 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
145168 Helobdella robusta 145168 N 0.718
AAEL002461 Aedes aegypti AAEL002461 N 0.746
AGAP000977 Anopheles gambiae AGAP000977 N 0.775
Ame_R006638 Ailuropoda melanoleuca Ame_R006638 N 0.819
Aqu1.200557 Amphimedon queenslandica Aqu1.200557 N 0.746
Aqu1.228439 Amphimedon queenslandica Aqu1.228439 N 0.746
Bm1_02690 Brugia malayi Bm1_02690 N 0.732
CAOG_00327 Capsaspora owczarzaki CAOG_00327 N 0.732
CBG02589 Caenorhabditis briggsae CBG02589 N 0.704
CPIJ015641 Culex quinquefasciatus CPIJ015641 N 0.703
CpipJ_CPIJ015641 Culex pipiens CpipJ_CPIJ015641 N 0.703
DGIL_AUG5s13597g2t1 Acyrtosiphon pisum DGIL_AUG5s13597g2t1 N 0.704
RBMX2 Anolis carolinensis ENSACAG00000008819 N 0.792
LOC534630 Bos taurus ENSBTAG00000006252 N 0.789
LOC613705 Bos taurus ENSBTAG00000014771 N 0.761
RBMX2 Canis familiaris ENSCAFG00000018770 N 0.797
LOC100388331 Callithrix jacchus ENSCJAG00000002436 N 0.819
RBMX2 Cavia porcellus ENSCPOG00000006640 N 0.806
ENSCSAVG00000001047 Ciona savignyi ENSCSAVG00000001047 N 0.746
rbmx2 Danio rerio ENSDARG00000044380 N 0.845
LOC100058600 Equus caballus ENSECAG00000008257 N 0.819
RBMX2 Erinaceus europaeus ENSEEUG00000000839 N 0.806
RBMX2 Echinops telfairi ENSETEG00000001763 N 0.792
RBMX2 Homo sapiens ENSG00000134597 N 0.819
RBMX2 Gasterosteus aculeatus ENSGACG00000001855 N 0.817
RBMX2 Gallus gallus ENSGALG00000004025 N 0.806
ENSGGOG00000016146 Gorilla gorilla ENSGGOG00000016146 N 0.806
RBMX2 Gorilla gorilla ENSGGOG00000023687 N 0.819
ENSGGOG00000026106 Gorilla gorilla ENSGGOG00000026106 N 0.778
RBMX2 Loxodonta africana ENSLAFG00000017625 N 0.784
ENSLAFG00000028277 Loxodonta africana ENSLAFG00000028277 N 0.817
RBMX2 Macropus eugenii ENSMEUG00000010913 N 0.819
RBMX2 Meleagris gallopavo ENSMGAG00000001801 N 0.778
RBMX2 Microcebus murinus ENSMICG00000015139 N 0.819
ENSMLUG00000010298 Myotis lucifugus ENSMLUG00000010298 N 0.819
ENSMLUG00000017095 Myotis lucifugus ENSMLUG00000017095 N 0.831
ENSMMUG00000001001 Macaca mulatta ENSMMUG00000001001 N 0.708
RBMX2 Macaca mulatta ENSMMUG00000008389 N 0.819
XP_001110036.1 Macaca mulatta ENSMMUG00000020845 N 0.806
ENSMODG00000011981 Monodelphis domestica ENSMODG00000011981 N 0.761
XM_001377711.1 Monodelphis domestica ENSMODG00000012002 N 0.806
ENSMODG00000019800 Monodelphis domestica ENSMODG00000019800 N 0.806
Rbmx2 Mus musculus ENSMUSG00000031107 N 0.833
RBMX2 Ornithorhynchus anatinus ENSOANG00000001362 N 0.730
RBMX2 Oryctolagus cuniculus ENSOCUG00000011809 N 0.781
ENSOCUG00000020937 Oryctolagus cuniculus ENSOCUG00000020937 N 0.703
ENSOGAG00000006237 Otolemur garnettii ENSOGAG00000006237 N 0.819
ENSOGAG00000009060 Otolemur garnettii ENSOGAG00000009060 N 0.778
RBMX2 Oryzias latipes ENSORLG00000013183 N 0.803
RBMX2 Procavia capensis ENSPCAG00000012903 N 0.778
ENSPPYG00000020717 Pongo pygmaeus ENSPPYG00000020717 N 0.792
XR_023755.1 Pan troglodytes ENSPTRG00000022269 N 0.792
RBMX2 Pteropus vampyrus ENSPVAG00000004425 N 0.819
Rbmx2 Rattus norvegicus ENSRNOG00000007371 N 0.833
RBMX2 Sorex araneus ENSSARG00000007350 N 0.789
RBMX2 Spermophilus tridecemlineatus ENSSTOG00000015391 N 0.819
RBMX2 Taeniopygia guttata ENSTGUG00000005239 N 0.708
RBMX2 Tetraodon nigroviridis ENSTNIG00000007672 N 0.887
RBMX2 Takifugu rubripes ENSTRUG00000001699 N 0.873
RBMX2 Tarsius syrichta ENSTSYG00000010611 N 0.775
RBMX2 Tursiops truncatus ENSTTRG00000016210 N 0.819
estExt_fgenesh1_pg.C_30395 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_30395 N 0.704
estExt_fgenesh2_pg.C_1800064 Branchiostoma floridae estExt_fgenesh2_pg.C_1800064 N 0.718
estExt_Genewise1Plus.C_110324 Daphnia pulex estExt_Genewise1Plus.C_110324 N 0.817
CG10466 Drosophila melanogaster FBgn0032822 N 0.901
GA10331-RA Drosophila pseudoobscura FBgn0070389 N 0.930
GF14433 Drosophila ananassae FBgn0091460 N 0.944
GG21207 Drosophila erecta FBgn0113387 N 0.915
GH13830 Drosophila grimshawi FBgn0121306 N 0.901
GI11259 Drosophila mojavensis FBgn0134020 N 0.986
GI11260 Drosophila mojavensis FBgn0134021 N 0.986
GI20215 Drosophila mojavensis FBgn0142951 N 0.986
GL26176 Drosophila persimilis FBgn0163758 N 0.930
GM17378 Drosophila sechellia FBgn0172288 N 0.901
GD24233 Drosophila simulans FBgn0195582 N 0.901
GK14925 Drosophila willistoni FBgn0216930 N 0.873
GE13281 Drosophila yakuba FBgn0230967 N 0.901
fgenesh2_pg.C_sca_10000115 Lottia gigantea fgenesh2_pg.C_sca_10000115 N 0.789
gw.130.169.1 Nematostella vectensis gw.130.169.1 N 0.746
gw1.1.2244.1 Trichoplax adhaerens gw1.1.2244.1 N 0.718
gw1.462.53.1 Capitella teleta gw1.462.53.1 N 0.746
ISCW009356 Ixodes scapularis ISCW009356 N 0.718
nasonia_NCBI_hmm382923 Nasonia vitripennis nasonia_NCBI_hmm382923 N 0.789
PHUM617480 Pediculus humanus PHUM617480 N 0.761
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.761
WUBG_13107 Wuchereria bancrofti WUBG_13107 N 0.732
XP_001180915.1 Strongylocentrotus purpuratus XP_001180915.1 N 0.775
XP_002164481.1 Hydra magnipapillata XP_002164481.1 N 0.761
XP_791635.2 Strongylocentrotus purpuratus XP_791635.2 N 0.775