GA22283-RA (Drosophila pseudoobscura)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0243690 T44380_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
fne
M115_0.6 		Drosophila melanogaster UUKDGUU RNAcompete
Ray et al.(2013)
RNCMPT00120 		0.987
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0272141 RRM 28 64
FBpp0272141 RRM 70 113
FBpp0272141 RRM 129 197
FBpp0272141 RRM 272 342

Links

Other RRM family RBPs
Other Drosophila pseudoobscura RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CC1G_11952 Coprinopsis cinerea CC1G_11952 N 0.000
CIMG_13627 Coccidioides immitis CIMG_13627 N 0.000
CPSG_04175 Coccidioides posadasii CPSG_04175 N 0.000
ENSGACG00000001944 Gasterosteus aculeatus ENSGACG00000001944 N 0.000
ENSGACG00000013495 Gasterosteus aculeatus ENSGACG00000013495 N 0.000
fgenesh3_pg.7__35 Postia placenta fgenesh3_pg.7__35 N 0.000
LOC_Os10g20570 Oryza sativa LOC_Os10g20570 N 0.000
PTTG_01003 Puccinia triticina PTTG_01003 N 0.000
PTTG_03581 Puccinia triticina PTTG_03581 N 0.000
PTTG_03611 Puccinia triticina PTTG_03611 N 0.000
PTTG_04497 Puccinia triticina PTTG_04497 N 0.000
PTTG_04681 Puccinia triticina PTTG_04681 N 0.000
PTTG_05127 Puccinia triticina PTTG_05127 N 0.000
PTTG_05245 Puccinia triticina PTTG_05245 N 0.000
PTTG_05279 Puccinia triticina PTTG_05279 N 0.000
PTTG_05310 Puccinia triticina PTTG_05310 N 0.000
PTTG_05387 Puccinia triticina PTTG_05387 N 0.000
PTTG_05476 Puccinia triticina PTTG_05476 N 0.000
PTTG_06000 Puccinia triticina PTTG_06000 N 0.000
PTTG_06677 Puccinia triticina PTTG_06677 N 0.000
PTTG_06885 Puccinia triticina PTTG_06885 N 0.000
PTTG_07053 Puccinia triticina PTTG_07053 N 0.000
PTTG_07232 Puccinia triticina PTTG_07232 N 0.000
PTTG_08329 Puccinia triticina PTTG_08329 N 0.000
PTTG_08342 Puccinia triticina PTTG_08342 N 0.000
PTTG_08960 Puccinia triticina PTTG_08960 N 0.000
PTTG_08980 Puccinia triticina PTTG_08980 N 0.000
PTTG_09062 Puccinia triticina PTTG_09062 N 0.000
PTTG_09070 Puccinia triticina PTTG_09070 N 0.000
PTTG_09362 Puccinia triticina PTTG_09362 N 0.000
PTTG_09697 Puccinia triticina PTTG_09697 N 0.000
PTTG_10004 Puccinia triticina PTTG_10004 N 0.000
PTTG_10119 Puccinia triticina PTTG_10119 N 0.000
PTTG_10291 Puccinia triticina PTTG_10291 N 0.000
PTTG_10344 Puccinia triticina PTTG_10344 N 0.000
PTTG_10464 Puccinia triticina PTTG_10464 N 0.000
PTTG_10645 Puccinia triticina PTTG_10645 N 0.000
PTTG_10688 Puccinia triticina PTTG_10688 N 0.000
PTTG_10706 Puccinia triticina PTTG_10706 N 0.000
PTTG_10798 Puccinia triticina PTTG_10798 N 0.000
PTTG_11204 Puccinia triticina PTTG_11204 N 0.000