PHUM394230 (Pediculus humanus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PHUM394230 T45357_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PHUM394230-PA RRM 168 237
PHUM394230-PA RRM 267 337
PHUM394230-PA RRM 436 490

Links

Other RRM family RBPs
Other Pediculus humanus RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL005046 Aedes aegypti AAEL005046 N 0.876
AAH75146 Xenopus laevis AAH75146 N 0.750
AAH77813 Xenopus laevis AAH77813 N 0.775
AGAP008433 Anopheles gambiae AGAP008433 N 0.873
amel4_ncbi_hmm11379 Apis mellifera amel4_ncbi_hmm11379 N 0.893
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.770
CPIJ014704 Culex quinquefasciatus CPIJ014704 N 0.869
CPIJ019416 Culex quinquefasciatus CPIJ019416 N 0.869
CpipJ_CPIJ014704 Culex pipiens CpipJ_CPIJ014704 N 0.869
CpipJ_CPIJ019416 Culex pipiens CpipJ_CPIJ019416 N 0.869
DGIL_AUG5s7518g10t1 Acyrtosiphon pisum DGIL_AUG5s7518g10t1 N 0.810
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.774
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.770
RBM39 Canis familiaris ENSCAFG00000008327 N 0.770
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.770
RBM39 Cavia porcellus ENSCPOG00000014625 N 0.711
rbm39a Danio rerio ENSDARG00000011613 N 0.773
rbm39b Danio rerio ENSDARG00000041853 N 0.768
RBM39 Equus caballus ENSECAG00000013423 N 0.770
RBM39 Homo sapiens ENSG00000131051 N 0.770
RBM23 Gasterosteus aculeatus ENSGACG00000002797 N 0.720
RBM23 Gasterosteus aculeatus ENSGACG00000003376 N 0.727
RBM39 Gallus gallus ENSGALG00000001550 N 0.774
RBM39 Gorilla gorilla ENSGGOG00000003950 N 0.755
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.770
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.769
RBM39 Microcebus murinus ENSMICG00000001668 N 0.770
RBM39 Monodelphis domestica ENSMODG00000001557 N 0.766
Rbm39 Mus musculus ENSMUSG00000027620 N 0.770
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.770
RBM39 Otolemur garnettii ENSOGAG00000011227 N 0.730
RBM23 Oryzias latipes ENSORLG00000009919 N 0.747
RBM23 Oryzias latipes ENSORLG00000010370 N 0.749
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.770
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.770
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.770
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.770
RBM39 Sorex araneus ENSSARG00000007673 N 0.770
RBM39 Sus scrofa ENSSSCG00000007309 N 0.770
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.774
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.758
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.758
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.770
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.770
rbm39 Xenopus tropicalis ENSXETG00000007434 N 0.775
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.785
estExt_Genewise1Plus.C_150014 Daphnia pulex estExt_Genewise1Plus.C_150014 N 0.802
CG11266 Drosophila melanogaster FBgn0031883 N 0.809
GA10876-RA Drosophila pseudoobscura FBgn0070932 N 0.794
GF14957 Drosophila ananassae FBgn0091982 N 0.804
GG10454 Drosophila erecta FBgn0102763 N 0.809
GH13506 Drosophila grimshawi FBgn0120982 N 0.820
GI10246 Drosophila mojavensis FBgn0133011 N 0.809
GM16278 Drosophila sechellia FBgn0171194 N 0.809
GD23448 Drosophila simulans FBgn0194830 N 0.809
GJ18017 Drosophila virilis FBgn0205182 N 0.796
GK15272 Drosophila willistoni FBgn0217277 N 0.814
GE14328 Drosophila yakuba FBgn0231943 N 0.809
Sjc_0034270 Schistosoma japonicum Sjc_0034270 N 0.711
Smp_064590 Schistosoma mansoni Smp_064590 N 0.711