Ppa-etr-1 (Pristionchus pacificus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PPA28330 T45855_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
aret_CONSTRUCT
M229_0.6 		RNAcompete CONSTRUCTS UKUGUGU RNAcompete
Ray et al.(2013)
RNCMPT00270 		0.775
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
PPA28330 RRM 155 225

Links

Other RRM family RBPs
Other Pristionchus pacificus RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CC1G_00173 Coprinopsis cinerea CC1G_00173 N 0.000
EDP43472.1 Malassezia globosa EDP43472.1 N 0.000
estExt_fgenesh2_kg.C_40528 Agaricus bisporus estExt_fgenesh2_kg.C_40528 N 0.000
estExt_fgenesh2_pm.C_40077 Heterobasidion annosum estExt_fgenesh2_pm.C_40077 N 0.000
estExt_GeneWisePlus_human.C_40675 Laccaria bicolor estExt_GeneWisePlus_human.C_40675 N 0.000
fgenesh1_pm.C_scaffold_1000427 Schizophyllum commune fgenesh1_pm.C_scaffold_1000427 N 0.000
genemark.5060_g Pleurotus ostreatus genemark.5060_g N 0.000