e_gw1.158.95.1 (Physcomitrella patens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.158.95.1 T49795_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.158.95.1 RRM 18 87
e_gw1.158.95.1 RRM 109 178

Links

Other RRM family RBPs
Other Physcomitrella patens RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29889.m003323 Ricinus communis 29889.m003323 N 0.757
FCA Arabidopsis thaliana AT4G16280-TAIR-G N 0.714
BGIOSIBCE029031 Oryza indica BGIOSIBCE029031 N 0.700
cassava42168.valid.m1 Manihot esculenta cassava42168.valid.m1 N 0.750
cassava42169.valid.m1 Manihot esculenta cassava42169.valid.m1 N 0.750
chr4.CM0333.80.nd Lotus japonicus chr4.CM0333.80.nd N 0.707
Cucsa.247020 Cucumis sativus Cucsa.247020 N 0.771
e_gw1.114.188.1 Selaginella moellendorfii e_gw1.114.188.1 N 0.755
XM_002868098.1 Arabidopsis lyrata fgenesh2_kg.7__2690__AT4G16280.3 N 0.721
Glyma07g36630.1 Glycine max Glyma07g36630.1 N 0.743
Glyma17g03960.1 Glycine max Glyma17g03960.1 N 0.736
GRMZM2G065276 Zea mays GRMZM2G065276 N 0.700
GSVIVG00034966001 Vitis vinifera GSVIVG00034966001 N 0.771
gw1.47.198.1 Physcomitrella patens gw1.47.198.1 N 0.950
FCA Oryza sativa LOC_Os09g03610 N 0.700
Medtr8g136920 Medicago truncatula Medtr8g136920 N 0.729
PK18808.1 Cannabis sativa PK18808.1 N 0.736
ppa002369m Prunus persica ppa002369m N 0.757
Sb02g014690 Sorghum bicolor Sb02g014690 N 0.707