estExt_fgenesh1_pg.C_120176 (Monosiga brevicollis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pg.C_120176 T50485_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_120176 RRM 24 91

Links

Other RRM family RBPs
Other Monosiga brevicollis RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AMAG_00826 Allomyces macrogynus AMAG_00826 N 0.735
AMAG_02330 Allomyces macrogynus AMAG_02330 N 0.735
Ame_R001592 Ailuropoda melanoleuca Ame_R001592 N 0.710
Aqu1.214150 Amphimedon queenslandica Aqu1.214150 N 0.725
ENSACAG00000011677 Anolis carolinensis ENSACAG00000011677 N 0.710
Q2KIQ7_BOVIN Bos taurus ENSBTAG00000003407 N 0.710
XM_532889.2 Canis familiaris ENSCAFG00000003957 N 0.710
ENSCHOG00000000689 Choloepus hoffmanni ENSCHOG00000000689 N 0.710
LOC100386467 Callithrix jacchus ENSCJAG00000007716 N 0.710
ENSCPOG00000008016 Cavia porcellus ENSCPOG00000008016 N 0.710
sf3b14 Danio rerio ENSDARG00000009753 N 0.710
ENSDNOG00000007148 Dasypus novemcinctus ENSDNOG00000007148 N 0.710
0610009D07Rik Dipodomys ordii ENSDORG00000009772 N 0.710
LOC100056247 Equus caballus ENSECAG00000015618 N 0.710
ENSFCAG00000004304 Felis catus ENSFCAG00000004304 N 0.710
AC008073.5 Homo sapiens ENSG00000115128 N 0.710
ENSGACG00000004803 Gasterosteus aculeatus ENSGACG00000004803 N 0.725
SF3B14 Gallus gallus ENSGALG00000016501 N 0.710
ENSLAFG00000029423 Loxodonta africana ENSLAFG00000029423 N 0.710
ENSMGAG00000014057 Meleagris gallopavo ENSMGAG00000014057 N 0.710
ENSMLUG00000002473 Myotis lucifugus ENSMLUG00000002473 N 0.710
XM_001098393.1 Macaca mulatta ENSMMUG00000001282 N 0.710
0610009D07Rik Mus musculus ENSMUSG00000037361 N 0.710
ENSOANG00000007627 Ornithorhynchus anatinus ENSOANG00000007627 N 0.710
ENSOCUG00000022008 Oryctolagus cuniculus ENSOCUG00000022008 N 0.710
ENSORLG00000015955 Oryzias latipes ENSORLG00000015955 N 0.710
ENSPPYG00000012603 Pongo pygmaeus ENSPPYG00000012603 N 0.710
XM_515324.2 Pan troglodytes ENSPTRG00000011709 N 0.710
ENSPVAG00000011346 Pteropus vampyrus ENSPVAG00000011346 N 0.710
ENSSARG00000011902 Sorex araneus ENSSARG00000011902 N 0.710
ENSSSCG00000008587 Sus scrofa ENSSSCG00000008587 N 0.710
ENSTBEG00000012532 Tupaia belangeri ENSTBEG00000012532 N 0.710
SF3B14 Taeniopygia guttata ENSTGUG00000013191 N 0.710
ENSTNIG00000009719 Tetraodon nigroviridis ENSTNIG00000009719 N 0.739
ENSTRUG00000006551 Takifugu rubripes ENSTRUG00000006551 N 0.739
ENSTSYG00000013978 Tarsius syrichta ENSTSYG00000013978 N 0.710
ENSTTRG00000013430 Tursiops truncatus ENSTTRG00000013430 N 0.710
ENSVPAG00000005546 Vicugna pacos ENSVPAG00000005546 N 0.710
sf3b14 Xenopus tropicalis ENSXETG00000018204 N 0.710
estExt_fgenesh1_kg.C_20004 Daphnia pulex estExt_fgenesh1_kg.C_20004 N 0.721
estExt_fgeneshPB_pg.C_50297 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_50297 N 0.706
estExt_Genewise1Plus.C_10695 Chlorella NC64A estExt_Genewise1Plus.C_10695 N 0.710
estExt_GenewiseH_1.C_6800062 Branchiostoma floridae estExt_GenewiseH_1.C_6800062 N 0.725
fgeneshMC_pg.3_#_621 Mucor circinelloides fgeneshMC_pg.3_#_621 N 0.735
fgeneshTA2_pm.C_scaffold_21000029 Trichoplax adhaerens fgeneshTA2_pm.C_scaffold_21000029 N 0.721
RO3G_04631 Rhizopus oryzae RO3G_04631 N 0.721