mgf007506m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf007506m T53649_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf007506m RRM 6 71

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29682.m000595 Ricinus communis 29682.m000595 N 0.773
30073.m002271 Ricinus communis 30073.m002271 N 0.836
XM_002865109.1 Arabidopsis lyrata Al_scaffold_0008_128 N 0.701
AT4G17720 Arabidopsis thaliana AT4G17720-TAIR-G N 0.721
AT5G46870 Arabidopsis thaliana AT5G46870-TAIR-G N 0.701
BGIOSIBCE012743 Oryza indica BGIOSIBCE012743 N 0.710
BGIOSIBCE016670 Oryza indica BGIOSIBCE016670 N 0.701
BGIOSIBCE020376 Oryza indica BGIOSIBCE020376 N 0.791
BRADI1G51740 Brachypodium distachyon BRADI1G51740 N 0.791
cassava25244.valid.m1 Manihot esculenta cassava25244.valid.m1 N 0.750
cassava25245.valid.m1 Manihot esculenta cassava25245.valid.m1 N 0.761
cassava28770.m1 Manihot esculenta cassava28770.m1 N 0.712
Cucsa.318780 Cucumis sativus Cucsa.318780 N 0.701
Cucsa.322000 Cucumis sativus Cucsa.322000 N 0.779
XM_002867996.1 Arabidopsis lyrata fgenesh2_kg.7__2538__AT4G17720.1 N 0.721
Glyma01g01950.1 Glycine max Glyma01g01950.1 N 0.754
Glyma09g33960.1 Glycine max Glyma09g33960.1 N 0.768
GRMZM2G051890 Zea mays GRMZM2G051890 N 0.761
GRMZM2G102808 Zea mays GRMZM2G102808 N 0.776
GSVIVG00013098001 Vitis vinifera GSVIVG00013098001 N 0.836
GSVIVG00024381001 Vitis vinifera GSVIVG00024381001 N 0.851
LOC_Os03g50560 Oryza sativa LOC_Os03g50560 N 0.710
LOC_Os04g53330 Oryza sativa LOC_Os04g53330 N 0.701
LOC_Os06g02240 Oryza sativa LOC_Os06g02240 N 0.791
MDP0000177505 Malus x domestica MDP0000177505 N 0.746
MDP0000596287 Malus x domestica MDP0000596287 N 0.761
Medtr5g029540 Medicago truncatula Medtr5g029540 N 0.833
Medtr8g077770 Medicago truncatula Medtr8g077770 N 0.806
mgf014593m Mimulus guttatus mgf014593m N 0.746
PDK_20s1346002g005 Phoenix dactylifera PDK_20s1346002g005 N 0.821
PDK_20s1613681g001 Phoenix dactylifera PDK_20s1613681g001 N 0.761
PK05006.1 Cannabis sativa PK05006.1 N 0.836
A9PE83_POPTR Populus trichocarpa POPTR_0001s02090 N 0.833
B9GZI4_POPTR Populus trichocarpa POPTR_0003s09410 N 0.791
ppa024222m Prunus persica ppa024222m N 0.746
SB10G000940 Sorghum bicolor Sb10g000940 N 0.776