Minc05098 (Meloidogyne incognita)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Minc05098 T57787_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Minc05098a RRM 255 281
Minc05098a RRM 283 329
Minc05098a RRM 362 432
Minc05098a RRM 493 552
Minc05098c RRM 251 277
Minc05098c RRM 279 325
Minc05098c RRM 358 428
Minc05098c RRM 489 548
Minc05098e RRM 43 67
Minc05098e RRM 72 117
Minc05098e RRM 150 220
Minc05098e RRM 281 340
Minc05098f RRM 17 61
Minc05098f RRM 94 164
Minc05098f RRM 225 284
Minc05098g RRM 266 292
Minc05098g RRM 294 340
Minc05098g RRM 373 443
Minc05098g RRM 504 563

Links

Other RRM family RBPs
Other Meloidogyne incognita RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Bm1_09760 Brugia malayi Bm1_09760 N 0.800
CBN25972 Caenorhabditis brenneri CBN25972 N 0.760
CRE16190 Caenorhabditis remanei CRE16190 N 0.760
U2af2 Dipodomys ordii ENSDORG00000003250 I 0.725
U2AF2 Pan troglodytes ENSPTRG00000011523 I 0.725
estExt_fgenesh2_pm.C_220017 Branchiostoma floridae estExt_fgenesh2_pm.C_220017 N 0.707
e_gw.526.41.1 Branchiostoma floridae e_gw.526.41.1 N 0.711
Minc05905 Meloidogyne incognita Minc05905 N 1.000
Minc15342 Meloidogyne incognita Minc15342 N 0.830
Ppa-uaf-1 Pristionchus pacificus PPA25373 N 0.771
WUBG_04401 Wuchereria bancrofti WUBG_04401 N 0.800
uaf-1 Caenorhabditis elegans Y92C3B.2 N 0.776