ppa002584m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa002584m T58329_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa002584m RRM 37 107
ppa002584m RRM 125 194
ppa002584m RRM 216 285
ppa002584m RRM 320 389

Links

Other RRM family RBPs
Other Prunus persica RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
28644.m000904 Ricinus communis 28644.m000904 N 0.726
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.708
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.705
cassava31766.valid.m1 Manihot esculenta cassava31766.valid.m1 N 0.758
Cucsa.364050 Cucumis sativus Cucsa.364050 N 0.751
Glyma02g08480.1 Glycine max Glyma02g08480.1 N 0.708
Glyma16g27670.1 Glycine max Glyma16g27670.1 N 0.726
Glyma20g31120.1 Glycine max Glyma20g31120.1 N 0.747
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.705
GSVIVG00013699001 Vitis vinifera GSVIVG00013699001 N 0.751
MDP0000212007 Malus x domestica MDP0000212007 N 0.833
MDP0000286821 Malus x domestica MDP0000286821 N 0.847
B9GT62_POPTR Populus trichocarpa POPTR_0002s06340 N 0.726
B9H7X9_POPTR Populus trichocarpa POPTR_0005s22040 N 0.740
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.701
ppa002607m Prunus persica ppa002607m N 0.705
ppa002618m Prunus persica ppa002618m N 0.712
ppa002620m Prunus persica ppa002620m N 0.712