mgf003557m (Mimulus guttatus)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		mgf003557m T00992_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf003557m CCCH ZF 159 184
mgf003557m RRM 324 384

Links

Other CCCH ZF,RRM family RBPs
Other Mimulus guttatus RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK01281.1 Cannabis sativa PK01281.1 N 0.000
cassava7063.valid.m1 Manihot esculenta cassava7063.valid.m1 N 0.759
Glyma14g01930.1 Glycine max Glyma14g01930.1 N 0.000
GRMZM2G044004 Zea mays GRMZM2G044004 N 0.000
Medtr5g008940 Medicago truncatula Medtr5g008940 N 0.000
Medtr5g102170 Medicago truncatula Medtr5g102170 N 0.000
MDP0000120462 Malus x domestica MDP0000120462 N 0.000
MDP0000214614 Malus x domestica MDP0000214614 N 0.713
ppa002383m Prunus persica ppa002383m N 0.000
ppa003564m Prunus persica ppa003564m N 0.713
cassava36931.valid.m1 Manihot esculenta cassava36931.valid.m1 N 0.736
cassava31400.valid.m1 Manihot esculenta cassava31400.valid.m1 N 0.759
cassava31399.valid.m1 Manihot esculenta cassava31399.valid.m1 N 0.759
PK20504.1 Cannabis sativa PK20504.1 N 0.724
AT2G05160 Arabidopsis thaliana AT2G05160-TAIR-G N 0.000
XM_002876131.1 Arabidopsis lyrata fgenesh2_kg.5__1664__AT3G52980.1 N 0.000
GSVIVG00037782001 Vitis vinifera GSVIVG00037782001 N 0.724
B9GI27_POPTR Populus trichocarpa POPTR_0001s26250 N 0.000
B9GTF9_POPTR Populus trichocarpa POPTR_0002s22240 N 0.000
B9IAR9_POPTR Populus trichocarpa POPTR_0014s16340 N 0.759
SB08G001980 Sorghum bicolor Sb08g001980 N 0.000
27613.m000645 Ricinus communis 27613.m000645 N 0.701
29223.m000023 Ricinus communis 29223.m000023 N 0.713
ppa019338m Prunus persica ppa019338m N 0.759