Bm1_13920 (Brugia malayi)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Bm1_13920 T01237_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Bm1_13920 CCCH ZF 90 115

Links

Other CCCH ZF family RBPs
Other Brugia malayi RBPs

104 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZC3H15 Pteropus vampyrus ENSPVAG00000004828 N 0.808
F27D4.4 Caenorhabditis elegans F27D4.4 N 0.731
GD10149 Drosophila simulans FBgn0181924 N 0.808
GK21573 Drosophila willistoni FBgn0223565 N 0.808
GSVIVG00016357001 Vitis vinifera GSVIVG00016357001 N 0.731
LOC_Os01g61830 Oryza sativa LOC_Os01g61830 N 0.731
NCU01795 Neurospora crassa NCU01795 N 0.731
PHUM521160 Pediculus humanus PHUM521160 N 0.769
SB03G039020 Sorghum bicolor Sb03g039020 N 0.731
72073 Helobdella robusta 72073 N 0.731
Aqu1.222312 Amphimedon queenslandica Aqu1.222312 N 0.846
cassava28857.valid.m1 Manihot esculenta cassava28857.valid.m1 N 0.731
zc3h15 Xenopus tropicalis ENSXETG00000013336 N 0.846
ZC3H15 Vicugna pacos ENSVPAG00000006980 N 0.808
Zc3h15 Rattus norvegicus ENSRNOG00000005256 N 0.808
RGD1564243 Rattus norvegicus ENSRNOG00000015276 N 0.769
ZC3H15 Sorex araneus ENSSARG00000012071 N 0.808
ZC3H15 Sus scrofa ENSSSCG00000016026 N 0.808
ZC3H15 Spermophilus tridecemlineatus ENSSTOG00000006873 N 0.808
ZC3H15 Tupaia belangeri ENSTBEG00000015530 N 0.808
ZC3H15 Taeniopygia guttata ENSTGUG00000011131 N 0.808
ZC3H15 Tetraodon nigroviridis ENSTNIG00000009860 N 0.808
ZC3H15 Takifugu rubripes ENSTRUG00000004988 N 0.769
ZC3H15 Tarsius syrichta ENSTSYG00000011019 N 0.808
ZC3H15 Tursiops truncatus ENSTTRG00000012425 N 0.808
cassava28858.valid.m1 Manihot esculenta cassava28858.valid.m1 N 0.731
cassava3130.m1 Manihot esculenta cassava3130.m1 N 0.731
gw1.233.15.1 Physcomitrella patens gw1.233.15.1 N 0.731
BGIBMGA011604 Bombyx mori BGIBMGA011604 N 0.769
Ame_R017931 Ailuropoda melanoleuca Ame_R017931 N 0.808
fgenesh1_pg.00710_#_148 Aspergillus carbonarius fgenesh1_pg.00710_#_148 N 0.731
Minc08580 Meloidogyne incognita Minc08580 N 0.808
PMAA_036360 Penicillium marneffei PMAA_036360 N 0.808
ppa007903m Prunus persica ppa007903m N 0.731
XP_002158150.1 Hydra magnipapillata XP_002158150.1 N 0.769
ZYRO0C15598g Zygosaccharomyces rouxii ZYRO0C15598g N 0.731
AAH77826 Xenopus laevis AAH77826 N 0.808
BAD89267 Xenopus laevis BAD89267 N 0.808
gw1.23.236.1 Trichoderma virens gw1.23.236.1 N 0.731
Glyma13g19900.1 Glycine max Glyma13g19900.1 N 0.731
e_gw.53.202.1 Nematostella vectensis e_gw.53.202.1 N 0.731
estExt_fgenesh1_pg.C_40101 Trichoderma atroviride estExt_fgenesh1_pg.C_40101 N 0.731
estExt_fgenesh1_pg.C_70448 Myceliophthora thermophila estExt_fgenesh1_pg.C_70448 N 0.731
estExt_fgenesh1_pm.C_130118 Neurospora tetrasperma estExt_fgenesh1_pm.C_130118 N 0.731
estExt_fgenesh2_kg.C_60126 Thielavia terrestris estExt_fgenesh2_kg.C_60126 N 0.731
estExt_Genewise1.C_110154 Neurospora discreta estExt_Genewise1.C_110154 N 0.731
estExt_Genewise1.C_210247 Trichoderma reesei estExt_Genewise1.C_210247 N 0.731
estExt_Genewise1Plus.C_sca_12_chr5_2_00446 Nectria haematococca estExt_Genewise1Plus.C_sca_12_chr5_2_00446 N 0.731
estExt_Genewise1Plus.C_sca_2280007 Lottia gigantea estExt_Genewise1Plus.C_sca_2280007 N 0.731
estExt_gwp.C_6160004 Branchiostoma floridae estExt_gwp.C_6160004 N 0.808
fgeneshTA2_pg.C_scaffold_15000146 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_15000146 N 0.731
Q6DD06 Xenopus laevis Q6DD06 N 0.808
BC1G_06447 Botrytis cinerea BC1G_06447 N 0.731
CBG00292 Caenorhabditis briggsae CBG00292 N 0.731
CBN03898 Caenorhabditis brenneri CBN03898 N 0.731
CBN11546 Caenorhabditis brenneri CBN11546 N 0.731
CJA17052 Caenorhabditis japonica CJA17052 N 0.731
CRE20408 Caenorhabditis remanei CRE20408 N 0.731
ZC3H15 Anolis carolinensis ENSACAG00000001916 N 0.846
ZC3HF_BOVIN Bos taurus ENSBTAG00000021762 N 0.808
ZC3H15 Canis familiaris ENSCAFG00000014494 N 0.808
ZC3H15 Choloepus hoffmanni ENSCHOG00000011958 N 0.808
ENSCING00000006888 Ciona intestinalis ENSCING00000006888 N 0.769
ZC3H15 Callithrix jacchus ENSCJAG00000005931 N 0.808
NFIA_073040 Neosartorya fischeri CADNFIAG00007899 N 0.769
ATEG_06133 Aspergillus terreus CADATEAG00002525 N 0.731
CPAG_03559 Candida parapsilosis CPAG_03559 N 0.731
LOAG_00784 Loa loa LOAG_00784 N 0.962
SS1G_13466 Sclerotinia sclerotiorum SS1G_13466 N 0.731
WUBG_13399 Wuchereria bancrofti WUBG_13399 N 1.000
amel4_ncbi_hmm11607 Apis mellifera amel4_ncbi_hmm11607 N 0.808
DGIL_AUG5s16g7t1 Acyrtosiphon pisum DGIL_AUG5s16g7t1 N 0.769
nasonia_NCBI_hmm1144383 Nasonia vitripennis nasonia_NCBI_hmm1144383 N 0.808
BGIOSIBCE004176 Oryza indica BGIOSIBCE004176 N 0.731
AFUA_5G13930 Aspergillus fumigatus CADAFUAG00006431 N 0.769
An14g05330 Aspergillus niger CADANGAG00011470 N 0.731
ANIA_06922 Aspergillus nidulans CADANIAG00007728 N 0.769
ENSCPOG00000012965 Cavia porcellus ENSCPOG00000012965 N 0.808
zc3h15 Danio rerio ENSDARG00000015889 N 0.769
ZC3H15 Macaca mulatta ENSMMUG00000017248 N 0.808
ITGAV Monodelphis domestica ENSMODG00000010653 N 0.808
Zc3h15 Mus musculus ENSMUSG00000027091 N 0.808
ZC3H15 Ornithorhynchus anatinus ENSOANG00000015742 N 0.808
ENSOCUG00000011903 Oryctolagus cuniculus ENSOCUG00000011903 N 0.808
ENSOCUG00000011909 Oryctolagus cuniculus ENSOCUG00000011909 N 0.769
ZC3H15 Otolemur garnettii ENSOGAG00000002182 N 0.808
ENSOPRG00000015790 Ochotona princeps ENSOPRG00000015790 N 0.808
ZC3H15 Oryzias latipes ENSORLG00000018606 N 0.769
ZC3H15 Procavia capensis ENSPCAG00000008499 N 0.808
ENSPPYG00000013004 Pongo pygmaeus ENSPPYG00000013004 N 0.808
ZC3H15 Myotis lucifugus ENSMLUG00000007741 N 0.808
ZC3H15 Microcebus murinus ENSMICG00000014245 N 0.808
ZC3H15 Dasypus novemcinctus ENSDNOG00000018840 N 0.769
Zc3h15 Dipodomys ordii ENSDORG00000011664 N 0.808
LOC100068634 Equus caballus ENSECAG00000017149 N 0.808
ENSETEG00000015556 Echinops telfairi ENSETEG00000015556 N 0.808
ZC3H15 Felis catus ENSFCAG00000008213 N 0.808
ZC3H15 Homo sapiens ENSG00000065548 N 0.808
ZC3H15 Gasterosteus aculeatus ENSGACG00000011648 N 0.769
ZC3HF_CHICK Gallus gallus ENSGALG00000002670 N 0.808
ZC3H15 Gorilla gorilla ENSGGOG00000000073 N 0.808
ENSLAFG00000001563 Loxodonta africana ENSLAFG00000001563 N 0.808
ZC3H15 Meleagris gallopavo ENSMGAG00000004447 N 0.808
ZC3H15 Pan troglodytes ENSPTRG00000012717 N 0.808